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Biology subjects

Feldman, A.

Publications and source records attributed to Feldman, A..

2 recordsLinked to original sources

Mechanistic macroecology: exploring the drivers of latitudinal variation in terrestrial body size in a General Ecosystem Model

Many mechanisms have been hypothesized to explain Bergmanns rule - the correlation of body size with latitude. However, it is not feasible to assess the contribution of hypothesised mechanisms by experimental manipulation or statistical correlation. Here, we evaluate two of the principal hypothesised mechanisms, related to thermoregulation and resource availability, using structured experiments in a mechanistic global ecosystem model. We simulated the broad structure of assemblages and ecosystems using the Madingley model, a mechanistic General Ecosystem Model (GEM). We compared emergent modelled biogeographic patterns in body mass to empirical patterns for mammals and birds. We then explored the relative contribution of thermoregulation and resource availability to body mass clines by manipulating the models environmental gradients. Madingley produces body size gradients that are in broad agreement with empirical estimates. Thermoregulation and resource availability were both important controls on body mass for endotherms, but only temperature for ectotherms. Our results suggest that seasonality explains animal body mass patterns through a complex set of mechanisms. Process-based GEMs generate broadly realistic biogeographic body mass patterns. Ecologists can use them in novel ways: to explore causality, or for generating and testing hypotheses for large-scale, emergent ecological patterns. At the same time, macroecological patterns are useful for evaluating mechanistic models. Iteratively developing GEMs, and evaluating them against macroecological patterns, could generate new insights into the complex causes of such patterns.

ecology↗

Tuning the course of evolution on the biophysical fitness landscape of an RNA virus

Predicting viral evolution remains a major challenge with profound implications for public health. Viral evolutionary pathways are determined by the fitness landscape, which maps viral genotype to fitness. However, a quantitative description of the landscape and the evolutionary forces on it remain elusive. Here, we apply a biophysical fitness model based on capsid folding stability and antibody binding affinity to predict the evolutionary pathway of norovirus escaping a neutralizing antibody. The model is validated by experimental evolution in bulk culture and in a drop-based microfluidics device, the \"Evolution Chip\", which propagates millions of independent viral sub-populations. We demonstrate that along the axis of binding affinity, selection for escape variants and drift due to random mutations have the same direction. However, along folding stability, selection and drift are opposing forces whose balance is tuned by viral population size. Our results demonstrate that predictable epistatic tradeoffs shape viral evolution.

evolutionary biology↗