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Favretti, M.

Publications and source records attributed to Favretti, M..

3 recordsLinked to original sources

Replicated point processes with application to population dynamics models

In this paper we study spatially clustered distribution of individuals using point process theory. In particular we discuss the spatially explicit model of population dynamics of Shimatani (2010) which extend previous works on Malecot theory of isolation by distance. We reformulate Shimatani model of replicated Neyman-Scott process to allow for a general dispersal kernel function and we show that the random immigration hypothesis can be substituted by the long dispersal distance property of the kernel. Moreover, the extended framework presented here is fit to handle spatially explicit statistical estimators of genetic variability like Moran autocorrelation index, Sorensen similarity index, average kinship coefficient. We discuss the pivotal role of the choice of dispersal kernel for the above estimators in a toy model of dynamic population genetics theory.

ecology

The distance decay of similarity in tropical rainforests. A spatial point processes analytical formulation

In this paper we are concerned with the analytical description of the change in floristic composition (species turnover) with the distance between two plots of a tropical rainforest due to the clustering of the individuals of the different species. We describe the plant arrangement by a superposition of spatial point processes and in this framework we introduce an analytical function which represents the average spatial density of the Sorensen similarity between two infinitesimal plots at distance r. We see that the decay in similarity with the distance is essentially described by the pair correlation function of the superposed process and that it is governed by the most abundant species. We test our analytical model with empirical data obtained for the Barro Colorado Island and Pasoh rainforests. To this end we adopt the statistical estimator for the pair correlation function in [1] and we design a novel one for the Sorensen similarity. Furthermore, we test our analytical formula by modelling the forest study area with Neyman-Scott point processes. We conclude comparing the advantages of our approach with other ones existing in literature.

ecology

Biodiversity of Tropical Forests

The quantification of tropical tree biodiversity worldwide remains an open and challenging problem. In fact, more than two-fifths of the global tree population can be found either in tropical or sub-tropical forests1, but species identities are known only for {approx} 0.000067% of the individuals in all tropical forests2. For practical reasons, biodiversity is typically measured or monitored at fine spatial scales. However, important drivers of ecological change tend to act at large scales. Conservation issues, for example, apply to diversity at global, national or regional scales. Extrapolating species richness from the local to the global scale is not straightforward. Indeed, a vast number of different biodiversity estimators have been developed under different statistical sampling frameworks3-7, but most of them have been designed for local/regional-scale extrapolations, and they tend to be sensitive to the spatial distribution of trees8, sample coverage and sampling methods9. Here, we introduce an analytical framework that provides robust and accurate estimates of species richness and abundances in biodiversity-rich ecosystems, as confirmed by tests performed on various in silico-generated forests. The new framework quantifies the minimum percentage cover that should be sampled to achieve a given average confidence in the upscaled estimate of biodiversity. Our analysis of 15 empirical forest plots shows that previous methods10,11 have systematically overestimated the total number of species and leads to new estimates of hyper-rarity10 at the global scale11, known as Fishers paradox2. We show that hyper-rarity is a signature of critical-like behavior12 in tropical forests13-15, and it provides a buffer against mass extinctions16. When biotic factors or environmental conditions change, some of these rare species are more able than others to maintain the ecosystems functions, thus underscoring the importance of rare species.

ecology