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Ender, C.

Publications and source records attributed to Ender, C..

2 recordsLinked to original sources

Mapping the endothelial O-GlcNAcome uncovers CCAR1 as a regulator of senescence

O-GlcNAcylation, the reversible addition of O-linked N-acetylglucosamine (O-GlcNAc) to serine and threonine residues, is a dynamic posttranslational modification that integrates nutrient and stress signals to fine-tune protein function and maintain cellular homeostasis. Although dysregulation of O-GlcNAc signaling is associated with age-related pathologies, its role in physiological aging remains unclear. Here we show that chronologically aged human vascular endothelial cells exhibit reduced O-GlcNAcylation due to altered abundance of enzymes in the hexosamine biosynthesis pathway and O-GlcNAc cycling. Conversely, the attenuation of O-GlcNAcylation achieved by genetic or pharmacological means, induced senescence via canonical p53/p21CIP1 and p16INK4a/Rb pathways and impaired key endothelial functions, such as proliferation and angiogenic capacity. Importantly, O-GlcNAcylated substrates identified across the entire proteome in endothelial cells closely aligned with these mechanistic and phenotypic findings. These substrates were enriched in regulators of processes central to senescence and vascular aging, such as genome stability, transcription, cell cycle, and methylation. Among these, we confirmed cell division cycle and apoptosis regulator 1 (CCAR1) as a bona fide O-GlcNAc substrate and demonstrate that its expression and O-GlcNAcylation decline during senescence in endothelial cells. CCAR1 depletion suppressed apoptosis and sensitized cells to oxidative stress-induced DNA damage, whereas restoration of CCAR1 levels mitigated premature and replicative senescence. Together, our findings establish O-GlcNAc signaling as a key regulatory system that integrates metabolic and stress cues to coordinate protein networks controlling genome stability, transcription and cellular stress adaptation, thereby preserving endothelial integrity and restraining senescence onset.

biochemistry↗

Transcription initiation RNAs are associated with chromatin activation mark H3K4me3

Transcription initiation RNAs (tiRNAs) are small, predominantly 18 nt, RNAs whose biogenesis is associated with nucleosomes adjacent to active transcription initiation sites. These loci usually contain modified histones associated with transcription initiation, including histone H3 trimethylated at lysine 4 (H3K4me3). To further characterize the relationship of tiRNAs and H3K4me3 marked nucleosomes, H3K4me3-targeted RNA:chromatin immunoprecipitations were performed in a murine macrophage cell line, and small RNA sequence libraries were constructed and subjected to deep sequencing. The H3K4me3 libraries exhibited a distinct profile of read lengths with a noticeable enrichment of sequences 17-26 nt in length, with a peak at [~]18nt that included tiRNAs. These RNAs show clear enrichment of sequences that map to genomic features known to be associated with transcription initiation, including CAGE transcription initiation sites (TSSs), sites of RNAPII occupancy, and H3K4me3 sites. The distribution of sequences that map in the vicinity of TSSs is consistent with previous descriptions of tiRNAs; viz. a major peak at approximately 40 nt downstream of the TSS, and a minor broader peak approximately 150-200 nt upstream of, and on the opposite strand to, the TSS. These results show that tiRNAs are physically associated with H3K4me3-marked chromatin. tiRNAs may be markers of RNAPII pausing and it remains a possibility that their association with H3K4me3 is part of an epigenetic signaling system.

genomics↗