Biology subjects

Dhingra, S.

Publications and source records attributed to Dhingra, S..

23 records · Page 2Linked to original sources

bioRxiv2021

Moving bar of light evokes vectorial spatial selectivity in the immobile rat hippocampus

Visual cortical neurons encode the position and motion direction of specific stimuli retrospectively, without any locomotion or task demand1. Hippocampus, a part of visual system, is hypothesized to require self-motion or cognitive task to generate allocentric spatial selectivity that is scalar, abstract2,3, and prospective4-7. To bridge these seeming disparities, we measured rodent hippocampal selectivity to a moving bar of light in a body-fixed rat. About 70% of dorsal CA1 neurons showed stable activity modulation as a function of the bars angular position, independent of behavior and rewards. A third of tuned cells also encoded the direction of revolution. In other experiments, neurons encoded the distance of bar, with preference for approaching motion. Collectively, these demonstrate visually evoked vectorial selectivity (VEVS). Unlike place cells, VEVS was retrospective. Changes in the visual stimulus or its trajectory did not cause remapping but only caused gradual changes. Most VEVS tuned neurons behaved like place cells during spatial exploration and the two selectivity were correlated. Thus, VEVS could form the basic building block of hippocampal activity. When combined with self-motion, reward, or multisensory stimuli8, it can generate the complexity of prospective representations including allocentric space9, time10,11, and episodes12.

neuroscience↗

bioRxiv2021

Role of molecular polymorphism in defining tau filament structures in neurodegenerative diseases

Misfolding and aggregation of tau protein is implicated in many neurodegenerative diseases that are typified by the presence of large, filamentous tau inclusions. The aggregation of tau in human brain is disease-specific with characteristic filaments defining the neuropathology. An understanding of how identical tau isoforms aggregate into disparate filament morphologies in phenotypically distinct tau-related diseases remains elusive. Here, we determine the structure of a brain-derived twisted tau filament in progressive supranuclear palsy and compare it to a dissimilar tau fold found in corticobasal degeneration. While the tau filament core in both diseases is comprised of residues 274 to 380, molecular-level polymorphism exists. Potential origins of the molecular polymorphism, such as noncovalent cofactor binding, are identified and predicted to modulate tau filament structures in the brain.

biophysics↗

bioRxiv2021

Anti-GD2 antibody disrupts GD2:Siglec-7 interactions and synergizes with CD47 blockade to mediate tumor eradication

The disialoganglioside GD2 is consistently overexpressed in neuroblastoma and osteosarcoma, and is variably expressed in other sarcomas, gliomas, neuroendocrine tumors, and epithelial cancers. Anti-GD2 antibodies have improved the survival rates of patients with neuroblastoma only when administered as part of intense chemotherapy-based cytotoxic regimens, which are associated with debilitating late effects including hearing loss, growth retardation, and secondary leukemias. Despite broad expression of GD2 on osteosarcoma, anti-GD2 antibody has not mediated significant antitumor activity in that disease or any other GD2+ cancers. CD47 is a checkpoint molecule overexpressed on tumor cells that inhibits macrophage activity, and CD47 blockade has demonstrated promising clinical activity in early human trials. We investigated whether anti-CD47 antibody could enhance the efficacy of anti-GD2 antibody in neuroblastoma and other GD2+ malignancies. We demonstrate substantial synergy of these two agents, resulting in the recruitment of tumor associated macrophages (TAMs) to mediate robust and durable anti-tumor responses. The responses are driven by GD2-specific factors that reorient the balance of macrophage activity towards phagocytosis of tumor cells, including disruption of a newly described GD2:Siglec-7 axis. These results demonstrate the unique synergy of combining anti-GD2 with anti-CD47, which has the potential to significantly enhance outcomes for children with neuroblastoma and osteosarcoma and will soon be investigated in a first-in-human clinical trial.

immunology↗

bioRxiv2020

MDA5 is an essential vita-PAMP sensor necessary for host resistance against Aspergillus fumigatus

RIG-I like receptors (RLR) are cytosolic RNA sensors that signal through the MAVS adaptor to activate interferon responses against viruses. Whether the RLR family has broader effects on host immunity against other pathogen families remains to be fully explored. Herein we demonstrate that MDA5/MAVS signaling was essential for host resistance against pulmonary Aspergillus fumigatus challenge through the regulation of antifungal leukocyte responses in mice. Activation of MDA5/MAVS signaling was driven by dsRNA from live A. fumigatus serving as a key vitality-sensing pattern-recognition receptor. Interestingly, induction of type I interferons after A. fumigatus challenge was only partially dependent on MDA5/MAVS signaling, whereas type III interferon expression was entirely dependent on MDA5/MAVS signaling. Ultimately, type I and III interferon signaling drove the expression of CXCL10. Furthermore, the MDA5/MAVS-dependent interferon response was critical for the induction of optimal antifungal neutrophil killing of A. fumigatus spores. In conclusion, our data broaden the role of the RLR family to include a role in regulating antifungal immunity against A. fumigatus. KEY POINTSO_LIMDA5 is essential for maintaining host resistance against Aspergillus fumigatus C_LIO_LIMDA5 serves as a critical vitality sensor after fungal challenge C_LIO_LIMDA5 is essential for IFN{lambda} expression and anti-fungal neutrophil killing C_LI

immunology↗

bioRxiv2019

A Ssd1 homolog impacts trehalose and chitin biosynthesis and contributes to virulence in Aspergillus fumigatus

Regulation of fungal cell wall biosynthesis is critical to maintain cell wall integrity in the face of dynamic fungal infection microenvironments. In this study, we observe that a yeast ssd1 homolog, ssdA, in the filamentous fungus Aspergillus fumigatus is involved in trehalose and cell wall homeostasis. An ssdA null mutant strain exhibited an increase in trehalose levels and a reduction in colony growth rate. Over-expression of ssdA in contrast perturbed trehalose biosynthesis and reduced conidia germination rates. The ssdA null mutant strain was more resistant to cell wall perturbing agents while over-expression of ssdA promoted increased sensitivity. Over-expression of ssdA significantly increased chitin levels and both loss and over-expression of ssdA altered sub-cellular localization of the class V chitin synthase CsmA. Strikingly, over-expression of ssdA abolished adherence to abiotic surfaces and severely attenuated the virulence of A. fumigatus in a murine model of invasive pulmonary aspergillosis. In contrast, despite the severe in vitro fitness defects observed upon loss of ssdA, neither surface adherence or murine survival was impacted. In conclusion, A. fumigatus SsdA plays a critical role in cell wall homeostasis that alters fungal-host interactions.\n\nImportanceLife threatening infections caused by the filamentous fungus Aspergillus fumigatus are increasing along with a rise in fungal strains resistant to contemporary antifungal therapies. The fungal cell wall and the associated carbohydrates required for its synthesis and maintenance are attractive drug targets given that many genes encoding proteins involved in cell wall biosynthesis and integrity are absent in humans. Importantly, genes and associated cell wall biosynthesis and homeostasis regulatory pathways remain to be fully defined in A. fumigatus. In this study, we identify SsdA, a model yeast Ssd1p homolog, as an important component of trehalose and fungal cell wall biosynthesis in A. fumigatus that consequently impacts fungal virulence in animal models of infection.

microbiology↗