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Biology subjects

Deets, K. A.

Publications and source records attributed to Deets, K. A..

3 recordsLinked to original sources

Grazing protists foster zebrafish virus transmission

Virus transmission is facilitated by diverse means, ranging from particles hitchhiking on dust and other fomites to vector-borne replication. Aquatic ecosystems are rich with interactions between species at various trophic levels, but how these interactions influence virus transmission and infection biology is largely unknown. By mixing zebrafish picornavirus 1 (ZfPV-1) with a panel of freshwater microbial eukaryotes, we found that phagocytic cells promote virus infections in larval zebrafish, even though the virus is unable to replicate in these microbes. Ciliates, which act as crucial concentrators of micronutrients via continuous grazing behavior, stood out as promoters of robust and accelerated virus infections. We found that simply adding the model ciliate Tetrahymena thermophila to mixed populations of infected and uninfected zebrafish facilitated chains of experimental ZfPV-1 transmission between fish. This process depends on Tetrahymena phagocytosis and is likely due to the ability of the ciliates to deliver a concentrated bolus of viruses when consumed by larval fish. Notably, the pathogenic snakehead rhabdovirus was not transmitted after mixing with Tetrahymena, revealing selectivity, potentially through coevolution with ZfPV-1, that is not evident in all RNA fish viruses. We propose that non-host ciliates can act as virus vessels that increase virus transmission between hosts while potentially altering courses of infection by boosting zebrafish immunity. Virus vessels fill a crucial space on the continuum of virus transmission dynamics for viruses lacking the ability to replicate in intermediate species. Given the tools available to manipulate these genetically accessible systems, this paradigm opens new avenues for investigating otherwise hidden features of infection biology with experiments better approximating natural complexity in the wild.

evolutionary biology↗

Pyroptosis-dependent and -independent cross-priming of CD8+ T cells by intestinal epithelial cell-derived antigen

The innate immune system detects pathogens and initiates adaptive immune responses. Inflammasomes are central components of the innate immune system, but whether inflammasomes provide sufficient signals to activate adaptive immunity is unclear. In intestinal epithelial cells (IECs), inflammasomes activate a lytic form of cell death called pyroptosis, leading to epithelial cell expulsion and the release of cytokines. Here we employed a genetic system to show that simultaneous antigen expression and inflammasome activation specifically in IECs is sufficient to activate CD8+ T cells. By genetic elimination of direct T cell priming by IECs, we found that IEC-derived antigens are cross-presented to CD8+ T cells. However, activation of CD8+ T cells by IEC-derived antigen only partially depended on IEC pyroptosis. In the absence of inflammasome activation, cross-priming of CD8+ T cells required Batf3+ dendritic cells (cDC1), whereas cross-priming in the presence of pyroptosis did not. These data suggest the existence of parallel pyroptosis-dependent and pyroptosis-independent but cDC1-dependent pathways for cross-presentation of IEC-derived antigens.

immunology↗

New mutant mouse models clarify the role of NAIPs, phosphorylation, NLRP3, and tumors in NLRC4 inflammasome activation

The NAIP/NLRC4 inflammasome is a cytosolic sensor of bacteria that activates Caspase-1 and initiates potent downstream immune responses. Structural, biochemical, and genetic data all demonstrate that the NAIP proteins act as receptors for specific bacterial ligands, while NLRC4 is a downstream adaptor protein that multimerizes with NAIPs to form a macromolecular structure called an inflammasome. However, several aspects of NLRC4 biology remain unresolved. For example, in addition to its clear function in responding to bacteria, NLRC4 has also been proposed to initiate anti-tumor responses, though the underlying mechanism is unknown. NLRC4 has also been shown to be phosphorylated on serine 533, and this modification was suggested to be important for NLRC4 function. In the absence of S533 phosphorylation, it was further proposed that another inflammasome component, NLRP3, can induce NLRC4 activation. We generated a new Nlrc4-deficient mouse line as well as mice encoding phosphomimetic S533D and non-phosphorylatable S533A NLRC4 proteins. Using these genetic models in vivo and in vitro, we fail to observe a role for phosphorylation in NLRC4 inflammasome function. Furthermore, we find no role for NLRP3 in NLRC4 function, or for NLRC4 in a model of melanoma. These results simplify and clarify our understanding of the mechanism of NAIP/NLRC4 activation and its biological functions.

immunology↗