Search bioRxiv⌕ Search

Biology subjects

Davis, I. S.

Publications and source records attributed to Davis, I. S..

2 recordsLinked to original sources

How many segments are enough to biomechanically model the feet? A comparison of inverse kinematics and dynamics in multisegmented foot models

Multisegmented foot models (MSFMs) capture kinematic and kinetic data of specific regions of the foot instead of representing the foot as a single, rigid segment. Models differ by the number of segments and segment definitions, so there is no consensus for best practice. It is unknown whether MSFMs yield the same joint kinematic and kinetic data and what level of detail is necessary to accurately measure such values. We compared the angle, moment, and power measurements at the tibiotalar, midtarsal, and metatarsophalangeal joints of four MSFMs using motion capture data of young adult runners during stance phase of barefoot walking and jogging. Of these models, three were validated: Oxford Foot Model, Milwaukee Foot Model, and Ghent Foot Model. One model was developed based upon literature review of existing models: the "Vogel" model. We performed statistical parametric mapping comparing joint measurements from each model to the corresponding results from the Oxford Model, the most heavily studied MSFM. We found that the Oxford Foot Model, Milwaukee Foot Model, Vogel Foot Model, and Ghent Foot Model do not provide the same results. The changes in model segment definitions impact the degrees of freedom in ways that alter the measured kinematic function of the foot, which in turn impacts the kinetic results. We also found that dynamic function of the midfoot/arch may be better captured by MSFMs with a separate midfoot segment. The results of this study capture the variability in performance of MSFMs and indicate a need to standardize the design of MSFMs.

bioengineering↗

Genetic architecture and evolution of color variation in American black bears

Color variation is a frequent evolutionary substrate for camouflage in small mammals but the underlying genetics and evolutionary forces that drive color variation in natural populations of large mammals are mostly unexplained. The American black bear, Ursus americanus, exhibits a range of colors including the cinnamon morph which has a similar color to the brown bear, U. arctos, and is found at high frequency in the American southwest. Reflectance and chemical melanin measurements showed little distinction between U. arctos and cinnamon U. americanus individuals. We used a genome-wide association for hair color as a quantitative trait in 151 U. americanus individuals and identified a single major locus (P < 10-13). Additional genomic and functional studies identified a missense alteration (R153C) in Tyrosinase-related protein 1 (TYRP1) that impaired protein localization and decreased pigment production. Population genetic analyses and demographic modeling indicated that the R153C variant arose 9.36kya in a southwestern population where it likely provided a selective advantage, spreading both northwards and eastwards by gene flow. A different TYRP1 allele, R114C, contributes to the characteristic brown color of U. arctos, but is not fixed across the range. HIGHLIGHTSO_LIThe cinnamon morph of American black bears and brown bears have different missense mutations in TYRP1 that account for their similar coloration C_LIO_LITYRP1 variants in American black bears and brown bears are loss-of-function alleles associated with impaired protein localization to melanosomes C_LIO_LIIn American black bears, the variant causing the cinnamon morph arose 9,360 years ago in the western lineage where it provides an adaptive advantage, and has spread northwards and eastwards by migration C_LI

evolutionary biology↗