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Darden, C. B.

Publications and source records attributed to Darden, C. B..

2 recordsLinked to original sources

SqueakPose Studio: An end-to-end platform for pose estimation and real-time edge-AI deployment

Accurate pose estimation underpins quantitative analysis of behavior, yet many deep learning-based tracking tools remain optimized for offline workflows that rely on fragmented software pipelines, workstation-grade GPUs, or external middleware to enable real-time deployment. Here we present an integrated software-hardware ecosystem for pose estimation that spans dataset creation, model training, offline analysis, and real-time deployment on embedded edge-computing devices. SqueakPose Studio provides a software suite for whole-frame, deep learning-based pose estimation that unifies dataset creation, manual and model-assisted labeling, model training, validation, and large-scale offline inference. The system leverages modern object-detection architectures to enable efficient end-to-end training and inference without patch-based sampling or multi-stage postprocessing, and supports execution on CPUs, GPUs, and Apple Silicon. For experimental settings requiring continuous recording and synchronized data acquisition, SqueakView enables real-time model deployment, video capture, and sensor logging on embedded edge-computing hardware, while MouseHouse provides a compact, modular enclosure designed for home cage-based experiments that integrates embedded GPU compute, microcontroller-based timing, and peripheral I/O. A shared data format and deterministic timing architecture ensure consistency across offline analysis and real-time deployment. Together, SqueakPose Studio, SqueakView, and MouseHouse provide a unified platform for pose estimation that supports both conventional offline analysis and embedded, real-time experimentation, without reliance on workstation-grade hardware or external middleware.

neuroscience↗

Acute EtOH enhances septohippocampal coordination but disrupts intrinsic hippocampal theta dynamics during foraging

Theta oscillations - rhythmic patterns of synchronous activity within discrete brain regions - are known to support memory, navigation, and behavioral coordination, and are sensitive to pharmacological manipulation. Acute ethanol (EtOH) exposure has been shown to alter theta oscillations, but its effects on transient theta bursts and cross- regional coordination during naturalistic behavior remain unclear. We recorded local field potentials (LFPs) from the medial septum (MS), hippocampal Cornu Ammonis 1 (CA1), and medial prefrontal cortex (mPFC) in freely foraging mice following intraperitoneal injection of EtOH (1.5 g/kg) or saline. We analyzed spectral power, theta burst dynamics, phase, and lag timing. Burst features from CA1 were used to train a machine learning classifier to predict session condition. EtOH impaired locomotion and reduced goal-directed behaviors, particularly early in the session. In CA1, theta power shifted toward lower frequencies and lagged coherence declined. EtOH increased the frequency but reduced the duration of theta bursts in CA1, and in MS, only burst count increased. EtOH enhanced the temporal alignment of MS-CA1 burst pairs. Phase- locking between CA1 and MS during coupled bursts remained present but showed altered structure. Our classifier achieved robust performance using burst features such as skew and entropy, and reliably distinguished treatment conditions. EtOH modulates septohippocampal dynamics by altering the timing and structure of theta bursts. These results suggest that burst-level features are sensitive markers of EtOHs circuit-level effects during naturalistic behavior.

neuroscience↗