Biology subjects

Dahlgren, J.

Publications and source records attributed to Dahlgren, J..

8 recordsLinked to original sources

bioRxiv2023

Abundance of Northern Hemisphere tree species declines in the warm and arid regions of their climatic niches

Climate change is expected to drive species towards colder and wetter regions of their distribution with alternative processes such as forest management having the potential to alter species displacements. Here, using data from more than two million monitored trees from 73 widely-distributed species, we quantify changes in tree species abundance across Northern Hemisphere forests and find a widespread decline in abundance across the whole of species climatic niches. Yet, our analysis revealed that this decline is heavily influenced by alterations at the stand-level and consequent stand development. Remarkably, when accounting for stand development, our findings show a consistent trend of species abundance optimum shifting towards cold and wet regions within their climatic niches. We provide species-specific information on the direction and magnitude of climate-driven changes in abundance that should be taken into account when designing conservation, management and restoration plans in an era of unprecedented human-caused environmental change.

ecology↗

bioRxiv2022

Beyond mean fitness: demographic stochasticity and resilience matter at tree species climatic edges.

AimLinking local population dynamics and species distributions is critical to predicting the impacts of climate change. While many studies focus on the mean fitness of populations, theory shows that species distributions can be shaped by demographic stochasticity or population resilience. Here we examine how mean fitness (measured by invasion rate), demographic stochasticity, and resilience (measured by the ability to recover from disturbance) constrain populations at the edges compared to the climatic center. LocationEurope: Spain, France, Germany, Finland, and Sweden. PeriodForest inventory data used for fitting the models cover the period from 1985 to 2013. Major taxaDominant European tree species; Angiosperms and Gymnosperms. MethodsWe developed dynamic population models covering the entire life cycle of 25 European tree species with climatically dependent recruitment models fitted to forest inventory data. We then ran simulations using integral projection and individual-based models to test how invasion rates, risk of stochastic extinction, and ability to recover from stochastic disturbances differ between the center and edges of species climatic niches. ResultsResults varied among species, but in general, demographic constraints were stronger at warm edges and for species in harsher climates. Conversely, recovery was more limiting at cold edges. In addition, we found that for several species, constraints at the edges were due to demographic stochasticity and recovery capacity rather than mean fitness. Main conclusionOur results highlight that mean fitness is not the only mechanism at play at the edges; demographic stochasticity and population capacity to recover also matter for European tree species. To understand how climate change will drive species range shifts, future studies will need to analyse the interplay between population mean growth rate and stochastic demographic processes as well as disturbances.

ecology↗

bioRxiv2020

Occurrence but not intensity of mortality rises towards the climatic trailing edge of tree species ranges in European forests.

AimTree mortality is increasing worldwide, leading to changes in forest composition and altering global biodiversity. Yet, due to the multi-faceted stochastic nature of tree mortality, large-scale spatial patterns of mortality across species ranges and their underlying drivers remain difficult to understand. Our main goal is to describe the geographical patterns and drivers of the occurrence and intensity of tree mortality in Europe. We hypothesize that the occurrence of mortality represents background mortality and is higher in the margin than the core populations, whereas the intensity of mortality could have a more even distribution according to the spatial and temporal stochasticity of die-off events. LocationEurope (Spain, France, Germany, Belgium, Sweden and Finland) Time period1981 to 2014. Major taxa studiedMore than 1.5 million trees belonging to 20 major forest tree species MethodsWe develop hurdle models to tease apart the occurrence and intensity of tree mortality in National Forest Inventory plots at range-wide scale. The occurrence of mortality indicates that at least one tree has died in the plot and the intensity of mortality refers to the number of trees dead per plot. ResultsThe highest mortality occurrence was found in peripheral regions and the climatic trailing edge linked with drought, whereas the intensity of mortality was driven by competition, drought and high temperatures and was uniformly scattered across species ranges. Main conclusionsOur findings provide a new perspective in our understanding of tree mortality across species ranges. We show that tree background mortality but not die-off is generally higher in the trailing edge populations, but whether other demographic traits such as growth, reproduction and regeneration would also decrease at the trailing edge of European tree populations needs to be explored.

ecology↗

bioRxiv2020

Drivers of large-scale spatial demographic variation in a perennial plant

To understand how the environment drives spatial variation in population dynamics, we need to assess the effects of a large number of potential drivers on the vital rates (survival, growth and reproduction), and explore these relationships over large geographical areas and long environmental gradients. In this study, we examined the effects of a broad variety of abiotic and biotic environmental factors, including intraspecific density, on the demography of the forest understory herb Actaea spicata between 2017 and 2019 at 40 sites across Sweden, including the northern range margin of its distribution. We assessed the effect of potential environmental drivers on vital rates using generalized linear mixed models (GLMMs), and then quantified the impact of each important driver on population growth rate ({lambda}) using integral projection models (IPMs). Population dynamics of A. spicata were mostly driven by environmental factors affecting survival and growth, such as air humidity, soil depth and forest tree species composition, and thus those drivers jointly determined the realized niche of the species. Soil pH had a strong effect on the flowering probability, while the effect on population growth rate was relatively small. In addition to identifying specific drivers for A. spicatas population dynamics, our study illustrates the impact that spatial variation in environmental conditions can have on {lambda}. Assessing the effects of a broad range of potential drivers, as done in this study, is important not only to quantify the relative importance of different drivers for population dynamics but also to understand species distributions and abundance patterns.

plant biology↗

bioRxiv2019

Tree demographic performance of European tree species at their hot and cold edges.

O_LISpecies range limits are thought to result from a decline in demographic performance at range edges. However, recent studies reporting contradictory patterns in species demographic performance at their edges cast doubt on our ability to predict climate change demographic impacts. To understand these inconsistent demographic responses at the edges, we need to shift the focus from geographic to climatic edges and analyse how species responses vary with climatic constraints at the edge and species ecological strategy. C_LIO_LIHere we parameterised integral projection models with climate and competition effects for 27 tree species using forest inventory data from over 90,000 plots across Europe. Our models estimate size-dependent climatic responses and evaluate their effects on two life trajectory metrics: lifespan and passage time - the time to grow to a large size. Then we predicted growth, survival, lifespan, and passage time at the hot and dry or cold and wet edges and compared them to their values at the species climatic centre to derive indices of demographic response at the edge. Using these indices, we investigated whether differences in species demographic response between hot and cold edges could be explained by their position along the climate gradient and functional traits related to their climate stress tolerance. C_LIO_LIWe found that at cold and wet edges of European tree species, growth and passage time were constrained, whereas at their hot and dry edges, survival and lifespan were constrained. Demographic constraints at the edge were stronger for species occurring in extreme conditions, i.e. in hot edges of hot-distributed species and cold edges of cold-distributed species. Species leaf nitrogen content was strongly linked to their demographic responses at the edge. In contrast, we found only weak links with wood density, leaf size, and xylem vulnerability to embolism. C_LIO_LISynthesis. Our study presents a more complicated picture than previously thought with demographic responses that differ between hot and cold edges. Predictions of climate change impacts should be refined to include edge and species characteristics. C_LI

ecology↗

bioRxiv2019

Local patch occupancy dynamics match the distribution of European trees at continental scale

Aim Processes driving current tree species distribution are still largely debated. Attempts to relate species distribution and population demography metrics have shown mixed results. In this context, we would like to test the hypotheses that the metapopulation processes of colonization and extinction are linked to species distribution models.Location Europe: Spain, France, Germany, Finland, and Sweden.Taxon Angiosperms and Gymnosperms.Methods For the 17 tree species analyzed we fitted species distribution model (SDM) relating environmental variables to presence absence data across Europe. Then using independent data from national forest inventories across Europe we tested whether colonization and extinction probabilities are related to occurrence probability estimated by the SDMs. Finally, we tested how colonization and extinction respectively drive probability of presence at the metapopulation equilibrium.Results We found that for most species at least one process (colonization/extinction) is related to the occurrence probability, but rarely both.Main conclusions Our study supports the view that metapopulation dynamics are partly related to SDM occurrence probability through one of the metapopulation probabilities. However these links are relatively weak and the metapopulation models tend to overestimate the occurrence probability. Our results call for caution in model extrapolating SDM models to metapopulation dynamics.Competing Interest StatementThe authors have declared no competing interest.View Full Text

ecology↗

bioRxiv2019

Gene expression signatures predict response to therapy with growth hormone

Recombinant human growth hormone (r-hGH) is used as a therapeutic agent for disorders of growth including growth hormone deficiency (GHD) and Turner syndrome (TS). Treatment is costly and current methods to model response can only account for up to 60% of the variance. The aim of this work was to take a novel genomic approach to growth prediction. GHD (n=71) and TS patients (n=43) were recruited in a study on the long term response to r-hGH over five years of therapy. Pharmacogenomic analysis was performed using 1219 genetic markers and baseline blood transcriptome. Random forest was used to determine predictive value of transcriptomic data associated with growth response. No genetic marker passed the stringency criteria required for predictive value. However, we demonstrated that transcriptomic data can be used to predict growth with a high accuracy (AUC > 0.9) for short and long term therapeutic response in GHD and TS. Network models identified an identical core set of genes in both GHD and TS at each year of therapy whose expression can be used to classify therapeutic response to r-hGH. Combining transcriptomic markers with clinical phenotype was shown to significantly reduce predictive error. We have characterised the utility of baseline transcriptome for the prediction of growth response including the identification of a set of common genes in GHD and TS. This work could be translated into a single genomic test linked to a prediction algorithm to improve clinical management. One Sentence SummaryA blood transcriptome signature predicts response to recombinant human growth hormone in both growth hormone deficient and Turner syndrome children Trial registration numbers: NCT00256126 & NCT00699855

clinical trials↗

bioRxiv2019

Similar patterns of background mortality across Europe are mostly driven by drought in European beech and a combination of drought and competition in Scots pine.

AimBackground tree mortality is a complex demographic process that affects forest structure and long-term dynamics. We aimed to test how drought intensity interacts with interspecific and intraspecific competition (or facilitation) in shaping individual mortality patterns across tree species ranges. LocationEuropean latitudinal gradient (Spain to Finland). Time period1985 - 2014. Major taxa studiedScots pine (Pinus sylvestris L.) and European beech (Fagus sylvatica L.). MethodsWe performed logistic regression models based on individual tree mortality recorded in five European National Forest Inventories. We computed the relative importance of climatic drought intensity, basal area of conspecific and heterospecific trees (proxy of indirect intra- and interspecific competition or facilitation) and the effects of their interactions on mortality along the latitudinal gradient of both species range. ResultsIncrease in drought intensity over the study period was associated with higher mortality rates in both species. Drought was the most important driver of beech mortality at almost all latitudes while Scots pine mortality was mainly driven by basal area. High conspecific basal area was associated with high mortality rates in both species while high heterospecific basal area was correlated with mortality rates that were high in Scots pine but low in beech. Main conclusionsBeech mortality was directly affected by drought while Scots pine mortality was indirectly affected by drought through interactions with basal area. Despite their different sensitivity to drought and basal area, the highest predicted mortality rates for both species were at the ecotone between Mediterranean and cool temperate biomes, which can be explained by the combined effect of drought and competition. In the context of global warming, which is expected to be particularly strong in the Mediterranean biome, our results suggest that populations at the southern limit of species ranges may experience increased mortality rates in the near future. BIOSKETCHThe authors research is focused on functional trait ecology and global change, with special attention to mortality and demography processes. The authors use modelling multidisciplinary approaches to understand complex processes in ecology on a large geographical scale.

ecology↗