Search bioRxiv⌕ Search

Biology subjects

Coste, C. F. D.

Publications and source records attributed to Coste, C. F. D..

2 recordsLinked to original sources

Kinship Demography: Inferring the expectation, variance and distribution of the number of collaterals of a dynamical process in a structured population

Structured population projection models are fundamental to many fields of science. They enable abundance forecasting for populations categorized by various traits such as age (for demography), patch (for spatial ecology), genotype (for genetics), infectious stage (for epidemiology) or capital (economics). The demography of a structured population, determined by the transition rates (e.g., survival, fertility) between its various states, also shapes its relatedness - or kinship - structure. This structure (a probabilistic genealogy) is crucial for understanding how individuals are related to the rest of the population and affects effective population size, inclusive fitness, inbreeding, pedigrees, relatedness, familial structures, etc. Despite its significance, the relationship between demography and kinship remains under-explored. By incorporating the generation number as a trait into the population structure, we derive the Kinship Formula, yielding the expected number of any kin for any structured population. This formula is simple to implement and fast to compute, even for complex models. Most importantly, it promises significant theoretical advances. From the Kinship Formula, one can, for instance, assess the impact of embedded processes (e.g., dispersal, inheritance, growth) on kinship, compute mean population relatedness and the eventual number of kin (including kin already dead or not born yet). The Kinship Formula derived here stems from a one-sex constant environment framework. Its simplicity should allow for extensions to include environmental and demographic stochasticity as well as two-sex models. Data accessibility statementNo new data are used. All data used to illustrate the method are public. The code related to the main text (R and Matlab) can be found in Supplementary Materials (S.M.VIII)

evolutionary biology↗

The Kinship Matrix: Inferring the Kinship Structure of a Population from its Demography

The familial structure of a population and the relatedness of its individuals are determined by its demography. There is, however, no general method to infer kinship directly from the life-cycle of a structured population. Yet this question is central to fields such as ecology, evolution and conservation, especially in contexts where there is a strong interdependence between familial structure and population dynamics. Here, we give a general formula to compute, from any matrix population model, the expected number of arbitrary kin (sisters, nieces, cousins, etc) of a focal individual ego, structured by the class of ego and of its kin. Central to our approach are classic but little-used tools known as genealogical matrices. Our method can be used to obtain both individual-based and population-wide metrics of kinship, as we illustrate. It also makes it possible to analyze the sensitivity of the kinship structure to the traits implemented in the model.

ecology↗