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Biology subjects

Coraman, E.

Publications and source records attributed to Coraman, E..

2 recordsLinked to original sources

The best of two worlds: using stacked generalization for integrating expert range maps in species distribution models

Species distribution models (SDMs) are powerful tools for assessing suitable habitat across large areas and at fine spatial resolution. Yet, the usefulness of SDMs for mapping species realized distributions is often limited, since data biases or missing information on dispersal barriers or biotic interactions hinder them from accurately delineating species range limits. One way to overcome this limitation is to integrate SDMs with expert range maps, which provide coarse-scale information on the extent of species ranges that is complementary to information offered by SDMs. Here, we propose a new approach for integrating expert range maps in SDMs based on an ensemble method called stacked generalization. Specifically, our approach relies on training a meta-learner regression model using predictions from one or more SDM algorithms alongside the distance of training points to expert-defined ranges as predictor variables. We demonstrate our approach with an occurrence dataset for 49 bat species covering four biodiversity hotspots in the Eastern Mediterranean, Western Asia, and Central Asia. Our approach offers a flexible method to integrate expert range maps with any combination of SDM modeling algorithms, thus facilitating the use of algorithm ensembles. In addition, it provides a novel, data-driven way to account for uncertainty in expert-defined ranges not requiring prior knowledge about their accuracy, which is often lacking. Our approach holds considerable promise for better understanding species distributions, and thus for biogeographical research and conservation planning. In addition, our work highlights the overlooked potential of stacked generalization as an ensemble method in species distribution modeling.

ecology↗

Reticulate Evolutionary History of a Western Palaearctic Bat Complex Explained by Multiple mtDNA Introgressions in Secondary Contacts

AimThere is increasing evidence showing that species within various taxonomic groups have reticulate evolutionary histories with several cases of introgression events. Investigating the phylogeography of species complexes can provide insight about the introgressions, when and where these hybridizations occurred. In this study, we investigate the biogeography of a widely distributed Western Palaearctic bat species complex, namely Myotis nattereri sensu lato. This complex exhibits high genetic diversity and in its western distribution range is composed of deeply diverged genetical lineages. However, little is known about the genetic structure of the eastern populations. We also infer the conservation and taxonomical implications of the identified genetic divergences.\n\nLocationWestern Palaearctic\n\nMethodsWe analyzed 175 specimens collected from 67 locations and sequenced one mitochondrial and four nuclear DNA markers, and combined these with the available Gen-Bank sequences. We used haplotype networks, PCA, t-SNE, and Bayesian clustering algorithms to investigate the population structure and Bayesian trees to infer the phylogenetic relationship of the lineages.\n\nMain conclusionsWe identified deeply divergent genetical lineages. In some cases, nuclear and mitochondrial markers were discordant, which we interpret are caused by hybridization between lineages. We identified three such introgression events. Our findings suggest that the M. nattereri complex has a reticulate evolutionary history with multiple cases of hybridizations between some of the identified lineages. We also suggest a revision in the taxonomy of this species group, with two possible new taxa: M. hoveli and M. tschuliensis.

evolutionary biology↗