Biology subjects

Coone, M.

Publications and source records attributed to Coone, M..

3 recordsLinked to original sources

bioRxiv2026

Host outnumbered: microbiomes and a fungal parasite interact to shape host genotype-dependent survival

Microbiomes are key determinants of host health, yet empirical evidence demonstrating their influence on host-parasite interactions is limited. We conducted a proof-of-principle experiment using the water flea Daphnia magna and its virulent yeast para-site Australozyma monospora (formerly Metschnikowia bicuspidata) to test if micro-biome composition alters infection outcomes. Axenic hosts were inoculated with a control microbiome (homogenates of laboratory-cultured Daphnia reared in natural freshwater) or a single bacterial strain (Rhizobium sp.), and exposed to the parasite. Host survival differed markedly between microbiome treatments and depended on parasite exposure. Prior to parasite exposure, hosts of one genotype exhibited high juvenile mortality when inoculated with the control microbiome (79%), compared to Rhizobium (19%) (the other genotype: 48% vs. 50%). Parasite exposure reduced survival, but the extent varied with microbiome composition: survival of hosts with a control microbiome (averaged across genotypes) declined from 66% to 0%; survival of those inoculated with Rhizobium sp. declined from 35% to 10%. In contrast, micro-biome composition did not influence parasite infectivity or net reproduction. Our results indicate that microbiome effects on host survival are genotype- and life-stage-dependent, differ between parasite-free and parasite-exposed conditions and may impact host-parasite dynamics primarily by influencing host viability rather than para-site performance.

ecology↗

bioRxiv2025

Rapid temporal adaptation structures tolerance to toxic cyanobacteria in a natural population of the water flea Daphnia.

Cyanobacteria blooms pose a substantial threat to freshwater systems globally. While zooplankton grazers such as Daphnia can have an important role in suppressing cyanobacteria blooms, cyanobacteria can adversely impact Daphnia fitness and even kill them. Earlier work has shown an evolutionary increase in tolerance to cyanobacteria across years and strong genotype x genotype interactions determining the interaction between Daphnia and the cyanobacterium Microcystis. Here, we test the hypothesis that D. magna can adapt during one growing season to changes in dominant strains of Microcystis. Over two consecutive years, we collected D. magna clonal lineages and Microcystis strains from a single pond early and late in the growing season and we assessed whether Daphnia survival differed when exposed to Microcystis strains from either the same or a different time point within the growth season. Our findings reveal important Daphnia genotype x Microcystis genotype interactions, with Daphnia survival being higher when exposed to Microcystis from the same time point than when exposed to Microcystis of a different time point. Our results extend earlier findings to variation within one single natural system and growth season, and suggest an important impact of rapid (co)evolutionary dynamics shaping the tolerance of zooplankton grazers to cyanobacteria.

evolutionary biology↗

bioRxiv2023

The effect of hypoxia on Daphnia magna performance and its associated microbial and bacterioplankton community: a scope for Genotype x Microbial community interactions upon environmental stress ?

The depletion of oxygen as a result of increased stratification and decreased oxygen solubility is one of the most significant chemical changes occurring in aquatic ecosystems as a result of global environmental change. Hence, more aquatic organisms will be exposed to hypoxic conditions over time. Deciphering the effects of hypoxia on strong ecological interactors in this ecosystems food web is critical for predicting how aquatic communities can respond to such an environmental disturbance. Here, (sub-)lethal effects of hypoxia and whether these are genotype specific in Daphnia, a keystone species of freshwater ecosystems, are studied. This is especially relevant upon studying genetic responses with respect to phenotypic switches (G x E interactions) upon environmental stress. Further, we investigated the effect of hypoxia on the Daphnia microbial community to test if the microbiome plays a role in the phenotypic switch and tolerance to hypoxia. For this, two Daphnia genotypes were exposed for two weeks to either hypoxia or normoxia and host performance was monitored together with changes in the host associated and free-living microbial community after this period. We found G x E interactions for some of the tested Daphnia performance traits. The microbial community responded to hypoxia stress with responses in the bacterioplankton and in the Daphnia associated microbial community with respect to species richness and community composition and structure. The latter response was different for the two genotypes suggesting that the microbiome plays an important role in G x E interactions with respect to hypoxia tolerance in Daphnia, but further testing (e.g. through microbiome transplants) is needed to confirm this.

ecology↗