Biology subjects

Convey, P.

Publications and source records attributed to Convey, P..

4 recordsLinked to original sources

bioRxiv2026

Lichen Growth Form Effects on Rock Weathering in Cold Biomes

Rock surface weathering is a critical element in the process of early soil formation, in which lichens are thought to play a significant role. Crustose lichens, with a large area of rock-surface contact, are generally considered more influential in rock weathering, while foliose and fruticose growth forms, with more developed three-dimensional structure and less rock-surface contact, are rarely considered in this context. Here, we test the extent to which all three growth forms contribute to granitic rock surface weathering in Maritime Antarctic ecosystems, by quantifying rock hardness beneath foliose (n = 2 species), fruticose (n = 2) and crustose lichens (n= 5). Our data confirm that foliose lichens reduced rock surface hardness by 9%, to a lesser extent than crustose and foliose lichens (40% and 31% reduction, respectively). To disentangle whether these effects result from lichen-induced weathering or lichen preference for pre-weathered rock, we also analyzed a dated deglaciation sequence on granitic rocks from the Morteratsch Glacier forefield in the Swiss Alps. At this location, the impact of crustose lichens on rock substrate hardness generally increased with time since exposure from glacial retreat and with lichen thallus size. We conclude that lichen presence on rock surfaces significantly reduces rock hardness, with crustose lichens having a greater impact than foliose and fruticose forms, highlighting the potential role of lichens of all three growth forms in driving substrate breakdown and shaping early-stage ecosystem processes in polar and alpine regions.

ecology↗

bioRxiv2025

Gaps and Advances in Long-Term Monitoring of Antarctic Near-Shore and Terrestrial Ecosystems

Environmental change due to greenhouse gas emissions is affecting ecosystems globally; in the polar regions in particular there is already significant evidence of change. The Antarctic Near-Shore and Terrestrial Observation System (ANTOS) aims to establish a cross-continent, cross-national observing network to assess environmental variability and change in the southern polar region. To understand how near-shore and terrestrial Antarctic ecosystems have and will continue to be impacted by anthropogenic environmental changes, a comprehensive review of current long-term monitoring efforts, and two surveys targeting Antarctic researchers, were carried out to evaluate existing monitoring efforts, environmental changes recorded, and to identify areas currently lacking sufficient observations. Results indicate that most data collection is manual and intra-annual, with significant long-term monitoring concentrated in regions with already established infrastructure. The surveys highlight the urgent need for comprehensive coverage of the Antarctics rapidly changing ecosystems using standardized monitoring protocols and increased collaboration. We recommend prioritizing areas experiencing rapid climatic changes and leveraging existing infrastructure to minimize environmental impact of monitoring activities and enhance data comparability across sites.

ecology↗

bioRxiv2024

Greening rates are sensitive to methodology and biology; comment to Sustained greening of the Antarctic Peninsula observed from satellites

Roland et al.1 claim to provide evidence for a greening trend throughout the Antarctic Peninsula region over the last four decades, based on satellite remote sensing data. However, the early period vegetation cover estimates do not match with the likely extent of vegetated areas in this region at that time, raising doubts about the magnitude of any greening trend. Furthermore, growth rates of mosses and higher plants in Antarctica are insufficient to explain the 14-fold green cover expansion claimed, and neither have such changes been observed at long-term monitoring sites or from field warming studies. The reported satellite time series analyses of the presented trend seems biased by satellite image availability, lack of consistency in the areas covered by imagery and processing pitfalls. Antarctic terrestrial ecosystems are indeed predicted to become greener with climate change, but at much slower rates than reported by Roland et al.1.

ecology↗

bioRxiv2019

Characterisation of Quorum Sensing System and Its Role in Global Regulation in Hafnia alvei

Quorum sensing (QS) is a regulatory process achieved via cell-to-cell communication that involves release and detection of autoinducers (AIs), and which occurs in a wide range of bacteria. To date, QS has been associated to events of pathogenesis, biofilm formation, and antibiotic resistance in clinical, industrial, and agricultural contexts. The main objective of this study was to characterise the role of N-Acyl homoserine lactone (AHL) type QS in Hafnia alvei FB1, a bacterial strain isolated from frozen vacuum-packed fish paste meatballs, via identification of QS core genes using a genomic approach, followed by comparative transcriptomic profiling between QS-deficient mutants and wild-type strains. H. alvei FB1 is known to produce two types of AHLs, namely, N-(3-oxohexanoyl) homoserine lactone (3OC6-HSL) and N-(3-oxooctanoyl) homoserine lactone (3OC8-HSL). The complete genome sequence of strain FB1 was obtained and a single gene for AHL synthase (halI) and its cognate receptor (halR) were identified. QS-deficient mutants of FB1 were constructed via the {lambda}-Red recombineering method. Removal of the QS genes in strain FB1 affected mainly mechanisms in cell division and nutrient uptake, as well as resistance to a number of antibiotics, which are crucial for survival, adaptation and colonisation of both food and the host gut environment. Impact statementThe Hafnia genus is known as opportunistic pathogen in both nosocomial and community-acquired infections, however, involvement and mechanism of pathogenesis of Hafnia in infection diseases is uncertain. We investigate the role of the signalling molecule, N-acyl homoserine lactones (AHLs), in a Hafnia alvei strain, since AHLs play important roles in pathogenicity, survival or adaptation in other pathogen. This comparative transciptomic study has revealed that AHLs are involved in mechanisms in cell division and nutrient uptake, as well as resistance to a number of antibiotics, which are crucial for survival, adaptation and colonisation of both food and the host gut environment. This finding provides insight and possible strategy to combat this opportunistic pathogen. Data summaryGenome sequence is deposited in NCBI GenBank under accession number CP009706. The transcriptomic data, have been deposited in the Gene Expression Omnibus (GEO) database (https://www.ncbi.nlm.nih.gov/gds) under accession number GSE93000.

genomics↗