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Biology subjects

Comont, G.

Publications and source records attributed to Comont, G..

3 recordsLinked to original sources

Wood composition, rather than microbial communities, underpins varietal differences in wood degradation and esca foliar symptom expression in grapevine

Deciphering the interplay between microbial communities and host defence mechanisms is key to understanding plant health. In perennial plants, the balance between endophytes and wood (i.e. secondary xylem) defence responses governs wood degradation and vascular disease expression. Esca is a complex vascular disease contributing to grapevine decline, with an incidence variable across cultivars but the mechanisms underlying its expression and varietal susceptibility remain unclear. We assessed relationships between internal wood degradation and esca foliar symptoms in Vitis vinifera L. cultivars grown in a common garden, and, at the cultivar level, we tested for correlations between (i) susceptibility to wood decay and esca expression (n = 16 cultivars) and (ii) wood biochemical traits, and healthy wood endophytic microbial communities (n = 23 cultivars). Unlike other types of necrosis, white-rot necrotic wood was significantly more abundant in plants that had expressed esca leaf symptoms in previous years, particularly in the most susceptible cultivars. These cultivars also contained significantly lower levels of constitutive wood extractives. However, glycosylated phenylpropanoids accumulated in the wood of esca-symptomatic plants, especially in highly susceptible cultivars. By contrast, esca expression and varietal susceptibility had only a marginal effect on the diversity, composition and putative functions of microbial communities in healthy wood. They did not influence either the relative abundance of Fomitiporia mediterranea, the putative causal agent of white-rot in grapevine. Esca susceptibility appears primarily linked to wood degradability and metabolic responses, rather than healthy wood's microbial communities, suggesting that the use of less susceptible varieties together with white-rot removal might attenuate grapevine decline.

plant biology↗

Nitrogen nutrition impacts grapevine esca leaf symptom incidence, physiology and metabolism.

Nitrogen plays a crucial role in plant growth and defence mechanisms, yet its role in plant-pathogen interactions is complex and remains largely unexplored, especially in perennial crops. This study aimed to investigate the effects of controlled nitrogen nutrition levels on disease incidence, fungal communities, and plant physiology and metabolism. Esca is a widespread grapevine vascular disease affecting physiology, xylem integrity and metabolism. Naturally infected Vitis vinifera L. cv. Sauvignon blanc were subjected to three ammonium nitrate treatments across three seasons, resulting in reduced esca incidence under nitrogen deficiency compared with medium nutrition levels, while excess nitrogen had no significant impact. Nitrogen treatments significantly impacted vine physiology and leaf metabolites but did not affect fungal wood communities. Nitrogen deficiency significantly reduced stem diameter, photosynthesis, and leaf area, likely decreasing whole-plant transpiration, while excess nitrogen increased these factors suggesting a key role of plant transpiration in esca incidence. Additionally, nitrogen deficiency led to significantly higher production of phenylpropanoids, particularly flavonoids, in leaf metabolomes compared to the medium level. These findings highlight the pivotal role of nitrogen in the development of esca through alterations in vine morphology, physiology and metabolism. Fertilization practices may be crucial in the management of plant diseases.

plant biology↗

Genome analysis of the esca-associated Basidiomycetes Fomitiporia mediterranea, Fomitiporia polymorpha, Inonotus vitis, and Tropicoporus texanus reveals virulence factor repertoires characteristic of white-rot fungi

Some Basidiomycete fungi are important plant pathogens, and certain species have been associated with the grapevine trunk disease esca. We present the genomes of four species associated with esca: Fomitiporia mediterranea, Fomitiporia polymorpha, Tropicoporus texanus, and Inonotus vitis. We generated high-qualityphased genome assemblies using long-read sequencing. The genomic and functional comparisons identified potential virulence factors, suggesting their roles in disease development. Similar to other white-rot fungi known for their ability to degrade lignocellulosic substrates, these four genomes encoded a variety of lignin peroxidases and carbohydrate-active enzymes (CAZymes) such as CBM1, AA9, and AA2. The analysis of gene family expansion and contraction revealed dynamic evolutionary patterns, particularly in genes related to secondary metabolite production, plant cell wall decomposition, and xenobiotic degradation. The availability of these genomes will serve as a reference for further studies of diversity and evolution of virulence factors and their roles in esca symptoms and host resistance.

genomics↗