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Coluccio, A.

Publications and source records attributed to Coluccio, A..

4 recordsLinked to original sources

New genetic tools in Finegoldia magna identify a conserved adhesin required for the formation of stress-tolerant aggregates

The Gram-positive obligate anaerobe Finegoldia magna is a member of the healthy human microbiota, but also acts as an opportunistic pathogen to cause persistent, biofilm-associated infections. Despite its prevalence on the human host, little is known about F. magna biology or the mechanisms underlying its clinically relevant phenotypes, partly due to the lack of genetic tools. We address this gap by establishing genetic approaches for investigating gene function in F. magna, which we apply to identify genetic determinants of aggregate biofilm formation. We found that F. magna isolates are naturally competent, allowing for targeted chromosomal integration of linear DNA constructs via homologous recombination. Transformation frequency varied substantially among strains and was also affected by factors such as homologous flank length, DNA concentration, and incubation method. To identify genes that mediate aggregate biofilm formation, we used experimental evolution to select for F. magna mutants that had lost the ability to aggregate. This approach identified a conserved locus encoding a putative adhesin that we named FafA (Finegoldia adhesion factor A). Next, we applied targeted mutagenesis tools to show that deletion of fafA markedly reduced autoaggregation but does not impair other modes of biofilm formation, including surface attachment or aggregation during agitation. Finally, we demonstrate that FafA-mediated aggregation protects F. magna from antibiotic and oxidative stress. Together, these findings establish a genetic framework for mechanistic studies in F. magna and identify FafA as a conserved adhesin that promotes aggregation and stress tolerance in this anaerobic pathobiont.

microbiology↗

Host nutrients drive paired-substrate growth and distinct biofilm lifestyles in Finegoldia magna

Host-associated bacteria navigate complex nutrient landscapes where metabolites act as both growth substrates and cues that shape behavior. Yet, for most commensal and pathogenic bacteria, the nutrients and metabolisms that support persistence in the host remain unknown. Finegoldia magna is an obligate anaerobe that normally colonizes human skin and mucosal surfaces but also causes persistent biofilm-associated infections on implanted medical devices and in chronic wounds. Here, we developed a defined medium to investigate how nutrients influence F. magna physiology. We found that F. magna has a remarkably restricted metabolism that is specialized to use a limited set of host-relevant nutrients, including glycine, fructose, nucleosides, and betaine. Carbon-source screens showed glycine was the only substrate that supported growth as a sole carbon source. Instead, growth typically required two carbon substrates: a compatible electron donor-acceptor pair, suggesting redox balance imposes major constraints on its metabolism. To determine whether these constraints extend to host environments, we cultured F. magna in media derived from human chronic wound tissue. Despite its chemical complexity, F. magna displayed a similarly restricted metabolic profile, primarily consuming peptides, nucleosides, and betaine. These nutrients also directed biofilm behavior, with different metabolites promoting surface attachment or aggregation. Our findings show that although F. magna lacks metabolic flexibility, this opportunistic pathogen appears specialized to exploit host-derived products of skin physiology, tissue damage, and inflammation. This work suggests that host-associated bacteria with highly specialized metabolisms may be especially responsive to nutrient availability, linking local metabolite composition to key persistence behaviors like biofilm formation.

microbiology↗

Bacterial threat assessment of bacteriophage infection is mediated by intracellular polyamine accumulation and Gac/Rsm signaling

When eukaryotic cells are killed by pathogenic microorganisms, damage-associated and pathogen-associated signals are generated that alert other cells of nearby danger. Bacteria can detect the death of their kin; however, how bacteria make threat assessments of cellular injury is largely unexplored. Here we show that polyamines released by lysed bacteria serve as damage-associated molecules in Pseudomonas aeruginosa. In response to exogenous polyamines, Gac/Rsm and cyclic-di-GMP signaling is activated and intracellular polyamine levels increase. In the absence of a threat, polyamines are catabolized, and intracellular polyamines return to basal levels, but cells infected by bacteriophage increase and maintain intracellular polyamine levels, which inhibits phage replication. Phage species not inhibited by polyamines did not trigger polyamine accumulation by P. aeruginosa, suggesting polyamine accumulation and metabolism are targets in the phage-host arms-race. Our results suggest that like eukaryotic cells, bacteria can differentiate damage-associated and pathogen-associated signals to make threat assessments of cellular injury. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=112 SRC="FIGDIR/small/486733v1_ufig1.gif" ALT="Figure 1"> View larger version (34K): org.highwire.dtl.DTLVardef@1f69334org.highwire.dtl.DTLVardef@13a4422org.highwire.dtl.DTLVardef@4f3edeorg.highwire.dtl.DTLVardef@a86c43_HPS_FORMAT_FIGEXP M_FIG C_FIG

microbiology↗

RASSF1A independence and early Galectin-1 upregulation in PIK3CA induced hepatocarcinogenesis: new therapeutic venues

Aberrant activation of the PI3K/AKT/mTOR and Ras/Mitogen-Activated Protein Kinase pathways is a hepatocarcinogenesis hallmark. In a subset of hepatocellular carcinomas (HCC), PI3K/AKT/mTOR signaling dysregulation depends on PIK3CA mutations, while RAS/MAPK activation is partly attributed to promoter methylation of the tumor suppressor RASSF1A. To evaluate a possible co-carcinogenic effect of PIK3CA activation and RASSF1A knockout, plasmids expressing oncogenic forms of PIK3CA (E545K or H1047R mutants) were delivered to the liver of RASSF1A knockout and wildtype mice by hydrodynamic tail vein injection combined with Sleeping Beauty-mediated somatic integration. Transfection of either PIK3CA E545K or H1047R mutants sufficed to induce hepatocellular carcinomas in mice irrespective of RASSF1A mutational background. The related tumors displayed a lipogenic phenotype with upregulation of Fatty acid synthase and Stearoyl-CoA desaturase-1 (SCD1). Galectin-1, which was commonly upregulated in preneoplastic lesions and tumors, emerged as a regulator of SCD1. Co-inhibitory treatment with PIK3CA inhibitors and the Galectin-1 inhibitor OTX-008 resulted in synergistic cytotoxicity in human HCC cell lines, suggesting novel therapeutic venues. Graphical AbstractHydrodynamic tail vein injection of Phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha (PIK3CA) mutant forms E545K and H1047R induces stepwise hepatocarcinogenesis in mice, independent of Ras association domain-containing protein 1 (RASSF1A) status. Gene expression analyses revealed an early increase in Galectin-1, which regulates the lipogenic enzyme Stearoyl-CoA desaturase-1 (SCD1). PIK3CA- and Galectin1 inhibitors act synergistically, pointing at novel therapeutic strategies. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=81 SRC="FIGDIR/small/448477v1_ufig1.gif" ALT="Figure 1"> View larger version (28K): org.highwire.dtl.DTLVardef@3e6292org.highwire.dtl.DTLVardef@1b994b5org.highwire.dtl.DTLVardef@d22411org.highwire.dtl.DTLVardef@3e05a5_HPS_FORMAT_FIGEXP M_FIG C_FIG

pathology↗