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Chu, H. T.

Publications and source records attributed to Chu, H. T..

2 recordsLinked to original sources

Perturbing glycosylphosphatidylinositol (GPI)-anchor biosynthesis alters cell wall architecture and modulates fungal morphology

Filamentous fungi are widely used for industrial protein production but their tendency to form dense mycelial pellets limits nutrient transfer, oxygen uptake and fermentation efficiency. While cell wall components are known to influence fungal aggregation, the molecular mechanisms linking cell wall biosynthesis to macroscopic morphology remain poorly defined. Using Aspergillus oryzae as a model, we show that perturbation of glycosylphosphatidylinositol (GPI)-anchored protein biosynthesis influences fungal morphology by altering cell wall composition. Disruption of the GPI ethanolamine phosphate transferase 1 (mcd4) or inhibition of glucosaminyl phosphatidylinositol acyltransferase Gwt1 using antifungal drug manogepix (MGX) induced hyper-branching and weakened the cell wall. Notably, chemical inhibition of Gwt1 by MGX causes a marked transition from pelleted to dispersed mycelial growth. Solid-state NMR (ssNMR) analysis revealed reorganisation of galactosaminogalactan (GAG) and galactomannan (GM), including complete loss of cationic galactosamine (GalN), a key determinant of hyphal adhesion. Transcriptomic analysis revealed downregulation of genes involved in somatic cell fusion, linking altered wall composition to impaired germling aggregation. Strikingly, MGX treatment induced distinct morphological outcomes in other industrially relevant fungi, indicating species-specific cell- wall dependencies. Together, these findings identify GPI-anchored proteins as key regulators of fungal morphology and provide a framework for rational morphology engineering to improve industrial fermentation.

molecular biology↗

The single-cell epigenetic regulatory landscape in mammalian perinatal testis development

Spermatogenesis depends on an orchestrated series of developing events in germ cells and full maturation of the somatic microenvironment. To date, the majority of efforts to study cellular heterogeneity in testis has been focused on single-cell gene expression rather than the chromatin landscape shaping gene expression. To advance our understanding of the regulatory programs underlying testicular cell types, we analyzed single-cell chromatin accessibility profiles in more than 25,000 cells from mouse developing testis. We showed that scATAC-Seq allowed us to deconvolve distinct cell populations and identify cis-regulatory elements (CREs) underlying cell type specification. We identified sets of transcription factors associated with cell type-specific accessibility, revealing novel regulators of cell fate specification and maintenance. Pseudotime reconstruction revealed detailed regulatory dynamics coordinating the sequential developmental progressions of germ cells and somatic cells. This high-resolution data also revealed putative stem cells within the Sertoli and Leydig cell populations. Further, we defined candidate target cell types and genes of several GWAS signals, including those associated with testosterone levels and coronary artery disease. Collectively, our data provide a blueprint of the regulon of the mouse male germline and supporting somatic cells.

developmental biology↗