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Chiew, M.

Publications and source records attributed to Chiew, M..

At least 19 recordsLinked to original sources

From 3D Time-of-Flight Angiography to Accelerated 4D Arterial Spin Labeling Angiography: A Fast Few-Shot Transfer Learning Approach

PurposeTo develop a data-efficient deep learning framework for rapid reconstruction of highly accelerated 4D arterial spin labeling (ASL) magnetic resonance angiography (MRA) with robust generalization using extremely limited acquired data, addressing the challenges of prolonged acquisition and reconstruction time. MethodsA simulation-driven, few-shot transfer learning approach was adopted by leveraging publicly available 3D time-of-flight (TOF)-MRA data to generate realistic multi-coil complex-valued pseudo-ASL k-space datasets for large-scale pre-training. A 3D unrolled reconstruction network was trained on this simulated data using a histogram-weighted loss and subsequently extended to 4D using lightweight temporal fusion modules. Fine-tuning was performed using only two experimentally acquired 4D ASL-MRA datasets. The method was evaluated on retrospectively and prospectively undersampled Cartesian 4D ASL-MRA data acquired at 3T and compared with compressed sensing (CS) and locally low-rank (LLR) reconstructions. ResultsThe proposed method achieved superior reconstruction quality compared with CS and LLR, with improved vessel depiction, particularly in distal branches, and enhanced temporal fidelity. Quantitative evaluation demonstrated higher vessel-masked peak signal-to-noise ratio and structural similarity index measure, along with increased error entropy, indicating reduced noise and structured artifacts. The initial pre-trained model already outperformed conventional methods, while additional 4D fine-tuning further improved performance. Robust reconstruction was demonstrated in prospectively undersampled data and multi-slab acquisitions, enabling large-coverage, time-resolved angiography within clinically feasible scan times (4-6 min). ConclusionsSimulation-driven pre-training combined with few-shot fine-tuning enables accurate and rapid reconstruction of highly accelerated 4D ASL-MRA in data-limited settings. The proposed framework provides a practical pathway toward clinically feasible, non-contrast dynamic cerebrovascular imaging.

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Combined Angiographic, Structural and Perfusion Radial Imaging using Arterial Spin Labeling

PurposeTo develop a non-contrast MRI method for the simultaneous acquisition of time-resolved 3D angiographic, perfusion and multi-contrast T1-weighted structural brain images in a single six-minute acquisition. MethodsThe proposed Combined Angiographic, Structural and Perfusion Radial Imaging using Arterial Spin Labeling (CASPRIA) pulse sequence uses pseudocontinuous arterial spin labeling (PCASL) to label inflowing blood, an inversion pulse to provide background suppression and T1-weighted contrast, and a continuous 3D golden ratio spoiled gradient echo readout. Label-control subtraction isolates the blood signal and can be flexibly reconstructed at high/low spatiotemporal resolution for angiography/perfusion imaging. The mean signal retains the static tissue, allowing T1-weighted structural images to be reconstructed at different effective inversion times. CASPRIA was compared with conventional time-of-flight (TOF) angiography, 3D-gradient and spin echo (3D-GRASE) PCASL perfusion imaging and magnetization-prepared rapid gradient echo (MP-RAGE) structural imaging (10 minutes total) in healthy volunteers. ResultsCASPRIA gave improved distal vessel visibility and fewer artefacts than TOF angiography, whilst also providing dynamic information, with blood transit time and dispersion maps. CASPRIA perfusion images were comparable to 3D-GRASE data, but without through-slice blurring or artefacts in inferior brain regions. Comparable quantitative cerebral blood flow maps were produced, with CASPRIA being significantly more repeatable. Structural CASPRIA images were comparable to MP-RAGE, but also yielded a range of T1-weighted contrasts and allowed quantitative T1 maps to be estimated. ConclusionCASPRIA is an efficient single acquisition to provide intrinsically co-registered quantitative information about brain blood flow and structure that has considerable advantages over conventional methods.

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Few-shot learning for highly accelerated 3D time-of-flight MRA reconstruction

PurposeTo develop a deep learning-based reconstruction method for highly accelerated 3D time-of-flight magnetic resonance angiography (TOF-MRA) that achieves high-quality reconstruction with robust generalization using extremely limited acquired raw data, addressing the challenge of time-consuming acquisition of high-resolution, whole-head angiograms. MethodsA novel few-shot learning-based reconstruction framework is proposed, featuring a 3D variational network specifically designed for 3D TOF-MRA that is pre-trained on simulated complex-valued, multi-coil raw k-space datasets synthesized from diverse open-source magnitude images and fine-tuned using only two single-slab experimentally acquired datasets. The proposed approach was evaluated against existing methods on acquired retrospectively undersampled in vivo k-space data from five healthy volunteers and on prospectively undersampled data from two additional subjects. ResultsThe proposed method achieved superior reconstruction performance on experimentally acquired in vivo data over comparison methods, preserving most fine vessels with minimal artifacts with up to 8-fold acceleration. Compared to other simulation techniques, the proposed method generated more realistic raw k-space data for 3D TOF-MRA. Consistently high-quality reconstructions were also observed on prospectively undersampled data. ConclusionsBy leveraging few-shot learning, the proposed method enabled highly accelerated 3D TOF-MRA relying on minimal experimentally acquired data, achieving promising results on both retrospective and prospective in vivo data while outperforming existing methods. Given the challenges of acquiring and sharing large raw k-space datasets, this holds significant promise for advancing research and clinical applications in high-resolution, whole-head 3D TOF-MRA imaging.

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Motion correction with subspace-based self-navigation for combined angiography, perfusion and structural imaging

Motion artifacts are problematic in many MRI modalities. "Self-navigating" approaches are desirable, since no additional scan time or hardware is required. However, the generation of a navigator image, to estimate and correct motion, is difficult in cases where the tissue contrast is changing during the navigator acquisition window, such as in magnetization- prepared methods. Here we propose a subspace approach to reconstruct accurate navigators in the presence of time-varying tissue contrast and apply it to a combined angiography, perfusion and structural imaging method using a golden ratio 3D cones trajectory. This arterial spin labeling-based pulse sequence relies on subtraction of label and control images to isolate the relatively weak blood signal, making it particularly susceptible to motion corruption. An inversion pulse leads to time-varying tissue contrast across the readout train, but by reconstructing subspace coefficient maps directly, artifacts due to the varying contrast were alleviated. This resulted in high-quality navigator images that were subsequently registered to estimate and correct for motion. In addition, a split-update method was proposed to efficiently reconstruct from mismatched label/control k-space data with locally low rank regularization enforced on the difference image. The correction process was tested with numerical simulation and in vivo data from 8 healthy subjects with and without cued motion. In numerical simulation, the subspace- based navigator achieved an 84% reduction in RMSE of residual motion compared to without motion correction. In vivo, motion correction resulted in noise-like and background artifacts being greatly reduced and vessel sharpness being noticeably improved. Correlation of angiography, perfusion and structural images with motion-free reference images also increased by 159%, 53% and 12%, respectively, after motion correction. These results show that subspace-based navigators can effectively improve the motion robustness of MR imaging in contrast-varying acquisitions.

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Ultra-high temporal resolution 4D angiography using arterial spin labeling with subspace reconstruction

PurposeTo achieve ultra-high temporal resolution non-contrast 4D angiography with improved spatiotemporal fidelity. MethodsContinuous data acquisition using 3D golden-angle sampling following an arterial spin labeling preparation allows for flexibly reconstructing 4D dynamic angiograms at arbitrary temporal resolutions. However, k-space data is often temporally "binned" before image reconstruction, negatively affecting spatiotemporal fidelity and limiting temporal resolution. In this work, a subspace was extracted by linearly compressing a dictionary constructed from simulated curves of an angiographic kinetic model. The subspace was used to represent and reconstruct the voxelwise signal timecourse at the same temporal resolution as the data acquisition without temporal binning. Physiological parameters were estimated from the resulting images using a Bayesian fitting approach. A group of 8 healthy subjects were scanned and the in-vivo results reconstructed by different methods were compared. Due to the difficulty of obtaining ground truth 4D angiograms with ultra-high temporal resolution, the in-vivo results were cross-validated with numerical simulations. ResultsThe proposed method enables 4D time-resolved angiography with much higher temporal resolution (14.7 ms) than previously reported ([~]50 ms) whilst maintaining high spatial resolution (1.1 mm isotropic). Blood flow dynamics were depicted in greater detail, thin vessel visibility was improved, and the estimated physiological parameters also exhibited more realistic spatial patterns with the proposed method. ConclusionIncorporating a subspace compressed kinetic model into the reconstruction of 4D ASL angiograms notably improved the temporal resolution and spatiotemporal fidelity, which was subsequently beneficial for accurate physiological modeling.

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DORSAL RAPHE NUCLEUS CONTROLS MOTIVATIONAL STATE TRANSITIONS IN MONKEYS

The dorsal raphe nucleus (DRN) is an important source of serotonin in the brain but fundamental aspects of its function remain elusive. Here, we present a combination of minimally invasive recording and disruption studies to show that DRN brings about changes in motivation states. We use recently developed methods for identifying temporal patterns in behaviour to show that monkeys change their motivation depending on the availability of rewards in the environment. Distinctive patterns of DRN activity occur when monkeys transition between a high motivation state occupied when rewards are abundant, to a low motivation state engendered by reward scarcity. Disrupting DRN diminishes sensitivity to the reward environment and perturbs transitions in motivational states.

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Multi-site Ultrashort Echo Time 3D Phosphorous MRSI repeatability using novel Rosette Trajectory (PETALUTE)

PurposeThis study aims 1) to implement an operator-independent acquisition, reconstruction, and processing pipeline using a novel rosette k-space pattern for UTE 31P 3D MRSI and 2) to evaluate the clinical applicability and replicability at different experimental setups. MethodsA multicenter repeatability study was conducted for the novel UTE 31P 3D Rosette MRSI at three institutions with different experimental setups. Non-localized 31P MRSI data of 5 healthy subjects at each site were acquired with an acquisition delay of 65 s and a final resolution of 10 x 10 x 10 mm3 in 9 min. Spectra were quantified using the LCModel package. The potential acceleration was achieved using compressed sensing on retrospectively undersampled data. Reproducibility at each site was evaluated using the inter-subject coefficient of variance. ResultsThis novel acquisition and advanced processing techniques yielded high-quality spectra and enabled the detection of the critical brain metabolites at three different sites with different hardware specifications. In vivo, feasibility with an acceleration factor of 4 in 6.75 min resulted in a mean Cramer-Rao lower bounds below 20% for PCr, ATPs, PME, and the mean CoV of ATP/PCr resulted in below %20. ConclusionWe demonstrated that UTE 31P 3D Rosette MRSI acquisition, combined with compressed sensing and LCModel analysis, allows patient-friendly, operator-independent, high-resolution 31P MRSI to be acquired at clinical setups.

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Efficient 3D cone trajectory design for improved combined angiographic and perfusion imaging using arterial spin labeling

PurposeTo improve the spatial resolution and repeatability of a non-contrast MRI technique for simultaneous time resolved 3D angiography and perfusion imaging by developing an efficient 3D cone trajectory design. MethodsA novel parameterized 3D cone trajectory design incorporating the 3D Golden Angle was integrated into 4D combined angiography and perfusion using radial imaging and arterial spin labeling (CAPRIA) to achieve higher spatial resolution and sampling efficiency for both dynamic angiography and perfusion imaging with flexible spatiotemporal resolution. Numerical simulations and physical phantom scanning were used to optimize the cone design. Eight healthy volunteers were scanned to compare the original radial trajectory in 4D CAPRIA with our newly designed cone trajectory. A locally low rank reconstruction method was used to leverage the complementary k-space sampling across time. ResultsThe improved sampling in the periphery of k-space obtained with the optimized 3D cone trajectory resulted in improved spatial resolution compared with the radial trajectory in phantom scans. Improved vessel sharpness and perfusion visualization were also achieved in vivo. Less dephasing was observed in the angiograms due to the short echo time of our cone trajectory and the improved k-space sampling efficiency also resulted in higher repeatability compared to the original radial approach. ConclusionThe proposed 3D cone trajectory combined with 3D Golden Angle ordering resulted in improved spatial resolution and image quality for both angiography and perfusion imaging and could potentially benefit other applications that require an efficient sampling scheme with flexible spatial and temporal resolution.

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Dynamic off-resonance correction improves functional image analysis in fMRI of awake behaving non-human primates

Use of functional MRI in awake non-human primate (NHPs) has recently increased. Scanning animals while awake makes data collection possible in the absence of anaesthetic modulation and with an extended range of possible experimental designs. Robust awake NHP imaging however is challenging due to the strong artifacts caused by time-varying off-resonance changes introduced by the animals body motion. Recently, an image reconstruction technique has been proposed to estimate these off-resonance changes using the navigator data that is typically collected during fMRI scans to correct the data and compensate for the changes. In this study, we sought to thoroughly investigate the effect of this correction on the brain activation estimates using extended awake NHP data. Our results show significant improvements in image fidelity using our proposed correction strategy, as well as greatly enhanced and more reliable activation estimates in GLM analyses.

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High-Resolution 3D Ultra-Short Echo Time MRI with Rosette k-Space Pattern for Brain Iron Content Mapping

BackgroundThe iron concentration increases during normal brain development and is identified as a risk factor for many neurodegenerative diseases, it is vital to monitor iron content in the brain non-invasively. PurposeThis study aimed to quantify in vivo brain iron concentration with a 3D rosette-based ultra-short echo time (UTE) magnetic resonance imaging (MRI) sequence. MethodsA cylindrical phantom containing nine vials of different iron concentrations (iron (II) chloride) from 0.5 millimoles to 50 millimoles and six healthy subjects were scanned using 3D high-resolution (0.94x0.94x0.94 mm3) rosette UTE sequence at an echo time (TE) of 20 s. ResultsIron-related hyperintense signals (i.e., positive contrast) were detected based on the phantom scan, and were used to establish an association between iron concentration and signal intensity. The signal intensities from in vivo scans were then converted to iron concentrations based on the association. The deep brain structures, such as the substantia nigra, putamen, and globus pallidus, were highlighted after the conversion, which indicated potential iron accumulations. ConclusionThis study suggested that T1-weighted signal intensity could be used for brain iron mapping.

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Optimization of 4D Combined Angiography and Perfusion using Radial Imaging and Arterial Spin Labeling

PurposeTo extend and optimize a non-contrast MRI technique to obtain whole head 4D (time-resolved 3D) angiographic and perfusion images from a single scan. Methods4D combined angiography and perfusion using radial imaging and arterial spin labeling (CAPRIA) uses pseudocontinuous labeling with a 3D golden ratio ("koosh ball") readout to continuously image the blood water as it travels through the arterial system and exchanges into the tissue. High spatial/temporal resolution angiograms and low spatial/temporal resolution perfusion images can be flexibly reconstructed from the same raw k-space data at any timepoint within the readout. A constant flip angle (CFA) and a quadratic variable flip angle (VFA) excitation schedule were optimized through simulations and tested in healthy volunteers. A conventional sensitivity encoding (SENSE) reconstruction was compared against a locally low rank (LLR) reconstruction, which leverages spatiotemporal correlations to improve reconstruction quality. Differences in image quality were assessed through split-scan repeatability. ResultsThe optimized VFA schedule (2-9{degrees}) reduced initial signal attenuation whilst boosting the signal at later timepoints, resulting in a significant (p < 0.001) improvement in image quality (up to 84%), particularly for the lower SNR perfusion images. The LLR reconstruction provided effective denoising without biasing the signal timecourses, significantly improving angiographic and perfusion imaging repeatability (up to 143%, p < 0.001) and enabling the clear depiction of small distal vessels and late tissue perfusion. Conclusion4D CAPRIA can be optimized using a VFA schedule and LLR reconstruction to yield whole head 4D angiograms and perfusion images from a single scan.

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Model-based dynamic off-resonance correction for improved accelerated fMRI in awake behaving non-human primates

PurposeTo estimate dynamic off-resonance due to vigorous body motion in accelerated fMRI of awake behaving non-human primates (NHPs) using the standard EPI 3-line navigator, in order to attenuate the effects of time-varying off-resonance on the reconstruction. MethodsIn NHP fMRI the animals head is usually head-posted, and the dynamic off-resonance is mainly caused by motion in body parts that are distant from the brain and have low spatial frequency. Hence, off-resonance at each frame can be approximated as a spatially linear perturbation of the off-resonance at a reference frame, and is manifested as a relative linear shift in k-space. Using GRAPPA operators, we estimated these shifts by comparing the 3-line navigator at each time frame with that at the reference frame. Estimated shifts were then used to correct the data at each frame. The proposed method was evaluated in phantom scans, simulations, and in vivo data. ResultsThe proposed method is shown to successfully estimate low-spatial order dynamic off-resonance perturbations, including induced linear off-resonance perturbations in phantoms, and is able to correct retrospectively corrupted data in simulations. Finally, it is shown to reduce ghosting artifacts and geometric distortions by up to 20% in simultaneous multi-slice in vivo acquisitions in awake-behaving NHPs. ConclusionA method is proposed that does not need any sequence modification or extra acquisitions and makes accelerated awake behaving NHP imaging more robust and reliable, reducing the gap between what is possible with NHP protocols and state-of-the-art human imaging.

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Myelin Imaging Using 3D Dual-echo Ultra-short Echo Time MRI with Rosette k-Space Pattern

PurposeThis study aimed to develop a new 3D dual-echo rosette k-space trajectory, specifically for ultra-short echo time (UTE) magnetic resonance imaging (MRI) applications. The direct imaging of the myelin bilayer, which has ultra-short transverse relaxation time (uT2), was acquired to test the performance of the proposed UTE sequence. Theory and MethodsThe rosette trajectory was developed based on rotations of a petal-like pattern in the kx-ky plane, with oscillated extensions in kz-direction for 3D coverage. Five healthy volunteers were recruited and underwent ten dual-echo 3D rosette UTE scans with various echo times (TEs). Dual-exponential complex model fitting was performed on the magnitude data to separate uT2 signals, with the output of uT2 fraction, uT2 value, and long T2 value. ResultsThe reconstructed images signal contrast between whiate matter (WM) and grey matter (GM) increased with longer TEs. The WM regions had higher uT2 fraction values than GM (10.9%{+/-}1.9% vs. 5.7%{+/-}2.4%). The uT2 value was approximately 0.15 milliseconds in WM. ConclusionThe higher uT2 fraction value in WM compared to GM demonstrated the ability of the proposed sequence to capture rapidly decaying signals.

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Improving robustness of 3D multi-shot EPI by structured low-rank reconstruction of segmented CAIPI sampling for fMRI at 7T

Three-dimensional (3D) encoding methods are increasingly being explored as alternatives to multi-slice two-dimensional (2D) acquisitions in fMRI, particularly in cases where high isotropic resolution is needed. 3D multi-shot EPI is the most popular 3D fMRI acquisition method, but is susceptible to physiological fluctuations which can induce inter-shot phase variations, and thus reducing the achievable tSNR, negating some of the benefit of 3D encoding. This issue can be particularly problematic at ultra-high fields like 7T, which have more severe off-resonance effects. In this work, we aim to improve the temporal stability of 3D multi-shot EPI at 7T by improving its robustness to inter-shot phase variations. We presented a 3D segmented CAIPI sampling trajectory ("seg-CAIPI") and an improved reconstruction method based on Hankel structured low-rank matrix recovery. Simulation and in-vivo results demonstrate that the combination of the seg-CAIPI sampling scheme and the proposed structured low-rank reconstruction is a promising way to effectively reduce the unwanted temporal variance induced by inter-shot physiological fluctuations, and thus improve the robustness of 3D multi-shot EPI for fMRI. HighlightsO_LIA 3D multi-shot EPI sampling trajectory using interleaved ordering along kz and a CAIPI blipping pattern improves robustness to inter-shot phase variations C_LIO_LIReconstruction based on Hankel structured low-rank matrix completion can significantly improve the temporal stability of 3D multi-shot acquisitions at 7T C_LIO_LI1.5mm resolution brain fMRI data show that ~60% improvement in mean tSNR can be obtained using the proposed method compared to the conventional method C_LIO_LI1.8mm resolution brain fMRI data demonstrate that the proposed method allows for 4-fold acceleration without loss of tSNR compared to conventional 3D EPI C_LIO_LIPreliminary brainstem fMRI data show that ~40% improvement in mean tSNR can be obtained using the proposed sampling and reconstruction C_LI

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Uncertainty in denoising of MRSI using low-rank methods

PurposeLow-rank denoising of MRSI data results in an apparent increase in spectral SNR. However, it is not clear if this translates to a lower uncertainty in metabolite concentrations after spectroscopic fitting. Estimation of the true uncertainty after denoising is desirable for downstream analysis in spectroscopy. In this work the uncertainty reduction from low-rank denoising methods based on spatio-temporal separability and linear predictability in MRSI are assessed. A new method for estimating metabolite concentration uncertainty after denoising is proposed. Finally, automatic rank threshold selection methods are assessed in simulated low SNR regimes. MethodsAssessment of denoising methods is conducted using Monte Carlo simulation of proton MRSI data, and by reproducibility of repeated in vivo acquisitions in five subjects. ResultsIn simulated and in vivo data, spatio-temporal based denoising is shown to reduce the concentration uncertainty, but linear prediction denoising increases uncertainty. Uncertainty estimates provided by fitting algorithms after denoising consistently under-estimate actual metabolite uncertainty. However, the proposed uncertainty estimation, based on an analytical expression for entry-wise variance after denoising, is more accurate. Finally, it is shown automated rank threshold selection using Marchenko-Pastur distribution can bias the data in low SNR conditions. An alternative soft-thresholding function is proposed. ConclusionLow-rank denoising methods based on spatio-temporal separability do reduce uncertainty in MRS(I) data. However, thorough assessment is needed as assessment by SNR measured from residual baseline noise is insufficient given the presence of non-uniform variance. It is also important to select the right rank thresholding method in low SNR cases.

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Subspace-constrained approaches to low-rank fMRI acceleration

Acceleration methods in fMRI aim to reconstruct high fidelity images from undersampled k-space, allowing fMRI datasets to achieve higher temporal resolution, reduced physiological noise aliasing, and increased statistical degrees of freedom. While low levels of acceleration are typically part of standard fMRI protocols through parallel imaging, there exists the potential for approaches that allow much greater acceleration. One such existing approach is k-t FASTER, which exploits the inherent low-rank nature of fMRI. In this paper, we present a reformulated version of k-t FASTER which includes additional L2 constraints within a low-rank framework. We evaluated the effect of three different constraints against existing low-rank approaches to fMRI reconstruction: Tikhonov constraints, low-resolution priors, and temporal subspace smoothness. The different approaches are separately tested for robustness to undersampling and thermal noise levels, in both retrospectively and prospectively-undersampled finger-tapping task fMRI data. Reconstruction quality is evaluated by accurate reconstruction of low-rank subspaces and activation maps. The use of L2 constraints were found to achieve consistently improved results, producing high fidelity reconstructions of statistical parameter maps at higher acceleration factors and lower SNR values than existing methods, but at a cost of longer computation time. In particular, the Tikhonov constraint proved very robust across all tested datasets, and the temporal subspace smoothness constraint provided the best reconstruction scores in the prospectively-undersampled dataset. These results demonstrate that regularized low-rank reconstruction of fMRI data can recover functional information at high acceleration factors without the use of any model-based spatial constraints. Highlights O_LIWe introduce an alternate implementation of low-rank fMRI reconstruction by using alternating minimization, which allows for easy integration of the subspace-specific L2 constraints C_LIO_LIWe use the alternating minimization approach to accelerate FMRI by exploiting coil sensitivity, low-rank structures, and additional L2 constraints C_LIO_LIWe found Tikhonov and Temporal Subspace Smoothness constraints show improved performance over other methods for R=15-30 C_LIO_LITikhonov Constraints were the most robust of the constrained-subspace methods, with the shortest reconstruction time C_LIO_LITemporal Subspace Smoothness produced the highest reconstruction scores in the prospectively under-sampled data C_LI

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The Set Increment with Limited Views Encoding Ratio (SILVER) Method for Optimizing Radial Sampling of Dynamic MRI

PurposeTo present and assess a method for choosing a fixed increment between spokes in radially sampled MRI that results in higher SNR than other radial sampling increments. Theory and MethodsSampling uniformity contributes to image SNR when reconstructed using linear methods. Thus, for a radial trajectory, uniformly spaced sampling is ideal. However, uniform sampling lacks post-acquisition reconstruction flexibility, which is often needed in dynamic imaging. Golden ratio-based increments are often used for this purpose. The method presented here, Set Increment with Limited Views Encoding Ratio (SILVER), optimizes sampling uniformity when a limited number of temporal resolutions are required. With SILVER, an optimization algorithm finds the angular increment that provides the highest uniformity for a pre-defined set of reconstruction window sizes. SILVER was tested over multiple sets and assessed in terms of uniformity, noise amplification, and SNR both in simulations and in acquisitions of a phantom and healthy volunteers. ResultsThe proposed algorithm produced trajectories that, for the optimized window sizes, had higher uniformity and lower image noise than golden ratio sampling both in a simulated single-coil system and in a multi-coil system, assessed using simulation, phantom, and in vivo experiments. The noise in SILVER optimized trajectories was comparable to uniformly distributed spokes whilst retaining flexibility in reconstruction at multiple temporal resolutions. In a resting state fMRI experiment, tSNR increases at different spatial and temporal resolutions ranged from 21-72%. ConclusionSILVER is a simple addition to any sequence currently using golden ratio sampling and significantly increases sampling efficiency and SNR.

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High-Resolution Metabolic Mapping of the Cerebellum Using a Reduced Field of View (Zoomed) Magnetic Resonance Spectroscopic Imaging

PurposeThe human cerebellum plays an important role in functional activity cerebrum which is ranging from motor to cognitive activities since due to its relaying role between spinal cord and cerebrum. The cerebellum poses many challenges to magnetic resonance spectroscopic imaging (MRSI) due to the caudal location, the susceptibility to physiological artifacts and partial volume artifact due to its complex anatomical structure. Thus, in present study, we propose a high-resolution MRSI acquisition scheme for the cerebellum. MethodsA zoomed or reduced-field of view (rFOV) metabolite-cycled full-intensity magnetic resonance spectroscopic imaging (MRSI) at 3T with a nominal resolution of 62.5 L was developed. Single-slice rFOV MRSI data were acquired from the cerebellum of 5 healthy subjects with a nominal resolution of 2.5{square}x{square}2.5{square}mm2 in 9{square}minutes 36. Spectra were quantified with LCModel. A spatially unbiased atlas template of the cerebellum was used for analyzing metabolite distributions in the cerebellum. ResultsThe high quality of the achieved spectra enabled to generate a high-resolution metabolic map of total N-acetylaspartate, total creatine, total choline, glutamate+glutamine and myo-inositol with Cramer-Rao lower bounds below 50%. A spatially unbiased atlas template of the cerebellum-based region of interest (ROIs) analysis resulted in spatially dependent metabolite distributions in 9 ROIs. The group-averaging across subjects in the Montreal Neurological Institute-152 template space allowed to generate a very high-resolution metabolite maps in the cerebellum. ConclusionThese findings indicate that very high-resolution metabolite probing of cerebellum is feasible using rFOV or zoomed MRSI at 3T.

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