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Biology subjects

Chatelain, P.

Publications and source records attributed to Chatelain, P..

4 recordsLinked to original sources

Whose energy cost would birds like to save? a revisit of the migratory formation flight

Line formation of migrating birds is well-accepted to be caused by birds exploiting wake benefits to save energy expenditure. A flying bird generates wingtip trailing vortices that stir the surrounding air upward and downward, and the following bird can get a free supportive lift when positioned at the upward airflow region. However, little to no attention has been paid to clarifying birds interests in energy saving, namely, do birds intend to reduce their individual energy consumption or the total energy of the flock? Here, by explicitly considering birds interests, we employ a modified fixed-wing wake model that includes the wake dissipation to numerically reexamine the energy saving mechanism in line formation. Surprisingly, our computations show that line formation cannot be explained simply by energy optimization. This remains true whether birds are selfish or cooperative. However, line formations may be explained by strategies optimizing energy cost and either avoiding collision or maintaining vision comfort. We also find that the total wake benefit of the formation attained by selfish birds does not differ much from that got by cooperative birds, the maximum that birds can attain. This implies that selfish birds are still able to fly in formation with very high efficiency of energy saving. In addition, we explore the hypothesis that birds are empathetic and would like to optimize their own energy cost and the neighbors. Our analysis shows that if birds are more empathetic, the resulting line formation shape deviates more from a straight line, and the flock enjoys higher total wake benefit. Author summaryMigratory birds can achieve remarkable performance and efficiency in energy exploitation during annual round-trip migration flight. Theoretical and experimental results have shown that this might be achieved because birds fly together in formation with specific shapes, e.g. the noticeable V formation, to utilize the aerodynamic benefits generated by their flock mates. However, it is still unclear whether energy-guided behavior indeed can lead to these formations. We show that the special formation adopted by migratory birds cannot be explained purely by the energy exploitation mechanism, and that birds vision performance and collision avoidance very likely also play important roles in the formation emergence. Our results imply that birds fly together in formation because of energy saving, but the specific shape of the formation depends on non-aerodynamic reasons. The research provides further understandings of the emergence of migratory formation and the energy saving mechanism of animal groups. It may also indicate that wing flapping, currently not considered, has an important effect on the way birds exploit aerodynamic benefits from others during the formation flight.

animal behavior and cognition↗

On the role of tail in stability and energetic cost of bird flapping flight

Migratory birds travel over impressively long distances. Consequently, they have to adopt flight regimes being both efficient - in order to spare their metabolic resources - and robust to perturbations. This paper investigates the relationship between both aspects, i.e. mechanical performance and stability in flapping flight of migratory birds. Relying on a poly-articulated wing morphing model and a tail-like surface, several families of steady flight regime have been identified and analyzed. These families differ by their wing kinematics and tail opening. A systematic parametric search analysis has been carried out, in order to evaluate power consumption and cost of transport. A framework tailored for assessing limit cycles, namely Floquet theory, is used to numerically study flight stability. Our results show that under certain conditions, an inherent passive stability of steady and level flight can be achieved. In particular, we find that progressively opening the tail leads to passively stable flight regimes. Within these passively stable regimes, the tail can produce either upward or downward lift. However, these configurations entail an increase of cost of transport at high velocities penalizing fast forward flight regimes. Our model-based predictions suggest that long range flights require a furled tail configuration, as confirmed by field observations, and consequently need to rely on alternative mechanisms to stabilize the flight.

bioengineering↗

Gene expression signatures predict response to therapy with growth hormone

Recombinant human growth hormone (r-hGH) is used as a therapeutic agent for disorders of growth including growth hormone deficiency (GHD) and Turner syndrome (TS). Treatment is costly and current methods to model response can only account for up to 60% of the variance. The aim of this work was to take a novel genomic approach to growth prediction. GHD (n=71) and TS patients (n=43) were recruited in a study on the long term response to r-hGH over five years of therapy. Pharmacogenomic analysis was performed using 1219 genetic markers and baseline blood transcriptome. Random forest was used to determine predictive value of transcriptomic data associated with growth response. No genetic marker passed the stringency criteria required for predictive value. However, we demonstrated that transcriptomic data can be used to predict growth with a high accuracy (AUC > 0.9) for short and long term therapeutic response in GHD and TS. Network models identified an identical core set of genes in both GHD and TS at each year of therapy whose expression can be used to classify therapeutic response to r-hGH. Combining transcriptomic markers with clinical phenotype was shown to significantly reduce predictive error. We have characterised the utility of baseline transcriptome for the prediction of growth response including the identification of a set of common genes in GHD and TS. This work could be translated into a single genomic test linked to a prediction algorithm to improve clinical management. One Sentence SummaryA blood transcriptome signature predicts response to recombinant human growth hormone in both growth hormone deficient and Turner syndrome children Trial registration numbers: NCT00256126 & NCT00699855

clinical trials↗

Metals enable a non-enzymatic acetyl CoA pathway

The evolutionary origins of carbon fixation, the biological conversion of CO2 to metabolites, remain unclear. Phylogenetics indicates that the AcCoA pathway, the reductive fixation of CO2 to acetyl and pyruvate, was a key biosynthetic route used by the Last Universal Common Ancestor (LUCA) to build its biochemistry. However, debate exists over whether CO2 fixation is a relatively late invention of pre-LUCA evolution or whether it dates back to prebiotic chemistry. Here we show that zero-valent forms of the transition metals known to act as co-factors in the AcCoA pathway (Fe0, Ni0, Co0) fix CO2 on their surface in a manner closely resembling the biological pathway, producing acetate and pyruvate in near mM concentrations following cleavage from the surface. The reaction is robust over a wide range of temperatures and pressures with acetate and pyruvate constituting the major products in solution at 1 bar of CO2 and 30 {degrees}g;C. The discovered conditions also promote 7 of the 11 steps of the rTCA cycle and amino acid synthesis, providing a stunning direct connection between simple inorganic chemistry and ancient CO2-fixation pathways. The results strongly sup-port the notion that CO2-fixation pathways are an outgrowth of spontaneous geochemistry.

evolutionary biology↗