Biology subjects

Carpentier, S. C.

Publications and source records attributed to Carpentier, S. C..

3 recordsLinked to original sources

bioRxiv2024

Date palm acclimates to aridity by diverting organic osmolytes for root osmotic adjustment in parallel with leaf membrane remodeling and ROS scavenging

Highlight statementOsmotic strength of date palm roots increases with soil desiccation, for which the accumulation of organic osmolytes, such as sugars, is essential in complement to energetically cheap mineral osmotics. Date palm (Phoenix dactylifera L.) is an important crop in arid regions that is well-adapted to desert ecosystems. To understand the remarkable ability to grow and yield in water-limited environments, experiments were conducted in a simulated desert environment with water-withholding for up to four weeks. In response to drought, root, rather than leaf, osmotic strength increased, with sugars contributing more to the osmolyte increase than minerals. Consistently, carbon and amino acid metabolism was acclimated toward biosynthesis at both the transcriptional and translational levels. In leaves, a remodeling of membrane systems was observed, suggesting changes in thylakoid lipid composition, which together with the restructuring of the photosynthetic apparatus, indicated an acclimation preventing oxidative damage. Thus, xerophilic date palm avoids oxidative damage under drought by combined prevention and rapid detoxification of oxygen radicals. Although minerals were expected to serve as cheap key osmotics, date palm also relies on organic osmolytes for osmotic adjustment of the roots during desiccation. The diversion of these resources away from growth is consistent with date palms strategy of generally slow growth in harsh environments and clearly indicates a trade-off between growth and stress-related physiological responses.

plant biology↗

bioRxiv2020

The impact of stomatal kinetics on diurnal photosynthesis and water use efficiency under fluctuating light

Dynamic light conditions require continuous adjustments of stomatal aperture. As stomatal conductance (gs) kinetics are a magnitude slower than photosynthesis (A), they are hypothesized to be key to plant productivity and water use efficiency. Using step-changes in light intensity, we studied the diversity of light-induced gs kinetics in relation to stomatal anatomy in five banana genotypes (Musa spp.) and modelled the impact on A and intrinsic water use efficiency (iWUE). Banana generally exhibited a strong limitation of A by gs, indicating a priority for water saving. Significant genotypic differences in gs kinetics and gs-based limitations of A were observed. For two contrasting genotypes the impact of differential gs kinetics on A and iWUE was further investigated under realistic diurnally fluctuating light conditions and at whole-plant level. Genotype-specific stomatal kinetics observed at the leaf level were corroborated at whole-plant level, suggesting that despite differences in gs control at different locations in the leaf and across leaves, genotype-specific responses are still maintained. However, under diurnally fluctuating light conditions gs speediness had only a momentary impact on the diurnal iWUE and carbon gain. During the afternoon there was a setback in kinetics: the absolute gs and the gs responses to light were damped, strongly limiting A and the diurnal iWUE. We conclude that the impact of the differential gs kinetics on the limitation of A was dependent on the target light intensity, the magnitude of change, the gs prior to the intensity change and particularly the time of the day. One sentence summaryGenotype-specific stomatal rapidity is for the first time validated at whole-plant level, but under fluctuating light the impact of stomatal dynamics depends on other factors like the time of the day.

plant biology↗

bioRxiv2019

Unraveling the complex story of intergenomic recombination in ABB allotriploid bananas

Background and AimsBananas (Musa spp.) are a major staple food for hundreds of millions of people in developing countries. The cultivated varieties are seedless and parthenocarpic clones of which the ancestral origin remains to be clarified. The most important cultivars are triploids with an AAA, AAB, or ABB genome constitution, with A and B genomes provided by M. acuminata and M. balbisiana, respectively. Previous studies suggested that inter-genome recombinations were relatively common in banana cultivars and that triploids were more likely to have passed through an intermediate hybrid. In this study, we investigated the chromosome structure within the ABB group, composed of starchy cooking bananas that play an important role in food security.\n\nMethodsUsing SNP markers called from RAD-Seq data, we studied the chromosome structure of 36 ABB genotypes spanning defined taxonomic subgroups. To complement our understanding, we search for similar events within nine AB hybrid genotypes.\n\nKey ResultsRecurrent Homoeologous Exchanges (HEs), i.e. chromatin exchanges between A and B subgenomes were unraveled with at least 9 founding events at the origin of the ABB bananas prior to the clonal diversification. The discovery of this nine founding events allows discussing the possible routes that led to the creation of the different subgroups and formulate new hypotheses. Based on our observations, we suggest different routes that gave rise to the current diversity in the ABB cultivars. Routes involving primary AB hybrids, routes leading to shared HEs and routes leading to a B excess ratio. Genetic fluxes took place between M. acuminata and M. balbisiana, particularly in India, where these unbalanced AB hybrids and ABB allotriploid originated and where cultivated M. balbisiana are abundant.\n\nConclusionsThe result of this study clarifies the classification of ABB cultivars and leading possibly to the revision of the classification of this subgroup. This is an important step to unravel the origin of polyploid bananas, and contributes to possible scenarios on the origin. ABB bananas are hypothesized to be more drought tolerant. Knowing the origin of our current cultivars and so their potential parents will help breeders to make the right choices for future crosses. The M. balbisiana genome is a good source to create new cultivars able to answer the numerous challenges of banana breeding.

genomics↗