Biology subjects

Can, T.

Publications and source records attributed to Can, T..

3 recordsLinked to original sources

bioRxiv2024

Random Tree Model of Meaningful Memory

Traditional studies of memory for meaningful narratives focus on specific stories and their semantic structures but do not address common quantitative features of recall across different narratives. We introduce a statistical ensemble of random trees to represent narratives as hierarchies of key points, where each node is a compressed representation of its descendant leaves, which are the original narrative segments. Recall is modeled as constrained by working memory capacity from this hierarchical structure. Our analytical solution aligns with observations from large-scale narrative recall experiments. Specifically, our model explains that (1) average recall length increases sublinearly with narrative length, and (2) individuals summarize increasingly longer narrative segments in each recall sentence. Additionally, the theory predicts that for sufficiently long narratives, a universal, scale-invariant limit emerges, where the fraction of a narrative summarized by a single recall sentence follows a distribution independent of narrative length.

neuroscience↗

bioRxiv2023

Flow-field inference from neural data using deep recurrent networks

Computations involved in processes such as decision-making, working memory, and motor control are thought to emerge from the dynamics governing the collective activity of neurons in large populations. But the estimation of these dynamics remains a significant challenge. Here we introduce Flow-field Inference from Neural Data using deep Recurrent networks (FINDR), an unsupervised deep learning method that can infer low-dimensional nonlinear stochastic dynamics underlying neural population activity. Using population spike train data from frontal brain regions of rats performing an auditory decision-making task, we demonstrate that FINDR outperforms existing methods in capturing the heterogeneous responses of individual neurons. We further show that FINDR can discover interpretable low-dimensional dynamics when it is trained to disentangle task-relevant and irrelevant components of the neural population activity. Importantly, the low-dimensional nature of the learned dynamics allows for explicit visualization of flow fields and attractor structures. We suggest FINDR as a powerful method for revealing the low-dimensional task-relevant dynamics of neural populations and their associated computations.

neuroscience↗

bioRxiv2023

Using large language models to study human memory for meaningful narratives

One of the most impressive achievements of the AI revolution is the development of large language models that can generate meaningful text and respond to instructions in plain English with no additional training necessary. Here we show that language models can be used as a scientific instrument for studying human memory for meaningful material. We developed a pipeline for designing large scale memory experiments and analyzing the obtained results. We performed online memory experiments with a large number of participants and collected recognition and recall data for narratives of different lengths. We found that both recall and recognition performance scale linearly with narrative length. Furthermore, in order to investigate the role of narrative comprehension in memory, we repeated these experiments using scrambled versions of the presented stories. We found that even though recall performance declined significantly, recognition remained largely unaffected. Interestingly, recalls in this condition seem to follow the original narrative order rather than the scrambled presentation, pointing to a contextual reconstruction of the story in memory.

neuroscience↗