Search bioRxiv⌕ Search

Biology subjects

Caglar, L. R.

Publications and source records attributed to Caglar, L. R..

2 recordsLinked to original sources

Geometric reshaping of task-relevant representations in the primary visual cortex supports perceptual decisions

Discriminating between two stimuli requires that their neural representations become separable by downstream readouts. This can be achieved geometrically, by disentangling the manifolds that population responses form in neural state space. Such reorganization has been observed in associative and motor areas, but never at the earliest stage of cortical processing. While task learning is known to impact neuronal representations in the primary visual cortex (V1), it is unknown if the population geometry is also reshaped to support perceptual decisions. We imaged V1 populations in mice trained on a Go/NoGo orientation discrimination task of increasing difficulty, and in naive mice passively viewing the same stimuli. Training reshaped the representational geometry so that the population responses were better linearly separable. A static compression made the Go and NoGo manifolds more compact and lower-dimensional from the earliest response, while a dynamic separation drove them further apart through the trial. Together, those transformations increased manifold capacity and readout accuracy. This reorganization made the Go-NoGo relationship in the neural state space more stable in Trained animals than in Naive ones. Within this learned geometry, the position of individual trials along the Go-NoGo axis predicted the animals' decision probabilities. Learning therefore promotes a disentangled and stable representational geometry that feeds the decision process.

neuroscience↗

DECODING SECOND ORDER ISOMORPHISMS IN THE BRAIN: The case of colors and letters.

We introduce a new method for decoding neural data from fMRI. It is based on two assumptions, first that neural representation is distributed over networks of neurons embeded in voxel noise and second that the stimuli can be decoded as learned relations from sets of categorical stimuli. We illustrate these principles with two types of stimuli, color (wavelength) and letters (visual shape), both of which have early visual system response, but at the same time must be learned within a given function or category (color contrast, alphabet). Key to the decoding method is reducing the stimulus cross-correlation by a matched noise voxel sample by normalizing the stimulus voxel matrix thus unmasking a highly discriminative neural profile per stimulus. Projection of this new voxel space (ROI) to a smaller set of dimensions (with e.g., non-metric Multidimensional scaling), the relational information takes a unique geometric form revealing functional relationships between sets of stimuli, defined by R. Shepard, as second-order isomorphisms (SOI). In the case of colors the SOI appears as a nearly equally spaced set of wavelengths arranged in a color wheel, with a gap between the "purples" and "reds" (consistent with the gap in the original Ekmans color set). In the case of letters, a cluster space resulted from the decorrelated voxel neural profiles, which matched the phrase structure of the mnemonic used for more than 100 years to teach children the alphabet (across multiple languages), The Alphabet Song.

neuroscience↗