Biology subjects

Buoro, M.

Publications and source records attributed to Buoro, M..

5 recordsLinked to original sources

bioRxiv2026

Dispersal, gene flow and adaptive differentiation in hierarchically structured populations

The balance between local adaptation and gene flow is rarely quantified when populations are hierarchically differentiated across multiple spatial scales. We addressed this gap in Atlantic salmon (Salmo salar) at its southern range edge, using 1342 individuals from 21 rivers along the French Atlantic and Channel coasts with a 60k SNP array, and combining estimates of dispersal with genome-wide scans for adaptive differentiation across spatial scales. Population structure was hierarchical, resolving five genetic clusters with differentiation among groups five times higher than among populations within them. Assignment tests revealed a marked contrast between clusters, but unassigned individuals reached very high proportions within some clusters, indicating that gene flow has already blurred among-populations differences. Adaptive differentiation was detected among and within clusters, but the loci involved overlapped only partially across scales and among clusters, indicating that adaptation at each hierarchical level relies on distinct sets of variants. Dispersal was a poor guide to where this signal persisted: retaining putative dispersers reduced the candidate set more than threefold, showing that immigrant genotypes could dilute among-populations allele-frequency contrasts within a single generation. Yet differentiation among populations remained strong, as expected if dispersers reproduce poorly. Resolving the balance between local adaptation and gene flow therefore requires accounting for dispersal and adaptive differentiation at different spatial scales, with direct implications for conserving hierarchically structured populations at climatically vulnerable range edges.

evolutionary biology↗

bioRxiv2025

Selection against dispersers: Sex, age and origin-dependent fitness differences in wild Atlantic salmon

Local adaptation is often portrayed as uniform fitness disadvantages of immigrants relative to residents. Yet dispersal costs vary with origin, sex, and life-history traits, shaping the balance between gene flow and adaptation. We quantified these heterogeneous costs by comparing the reproductive success of local and immigrant individuals using a 15-year genetic pedigree of Atlantic salmon (Salmo salar), including over 1,100 adults and 3,400 juveniles. Immigrants represented 19.5% of adults, showed male-biased dispersal, and averaged 15% lower reproductive success than locals. However, outcomes were strongly origin-dependent: immigrants from some populations suffered severe fitness costs while others matched or exceeded locals. Sex and life-history further modulated reproductive success: male immigrants underperformed local males, whereas multi-sea-winter females often equaled or outperformed female residents. Immigrant males partially compensated their fitness offset by acquiring more mates. These findings highlight that, while local adaptation promotes philopatry, immigrants origin effects should be considered in gene-flow adaptation dynamics.

evolutionary biology↗

bioRxiv2024

Prolonged low flows and non-native fish operate additively to alter insect emergence in mountain streams

Climate-induced flow alteration is subjecting mountain streams to more frequent and severe low-flow periods due to lower snowpack and earlier snowmelt. Yet, anticipating how stream ecosystems respond to prolonged low flows remains challenging because trophic levels can respond differently, and non-native predators could dampen or amplify responses. Here, we conducted a large-scale experiment to examine how early, prolonged low flows projected by the end of the century in Californias Sierra Nevada will alter mountain stream food webs and emerging insect flux--a critical stream-to-land cross-ecosystem linkage. Additionally, we tested whether Brown trout (Salmo trutta), a widespread non-native top predator, would change food-web responses to low-flow conditions. We found that early low flows and non-native fish effects were additive rather than synergistic or antagonistic. Early low flows did not alter the overall rate of emerging insects but they did shift community structure and reduce the prevalence of small-sized individuals--possibly reflecting larger size at emergence and faster growth rates due to warming. In contrast, non-native fish presence increased seasonally-aggregated abundance of stream insects up to 12%, mainly by increasing abundance of Chironomidae and small-sized Ephemeroptera and Trichoptera. In channels with fish, benthic algal biomass doubled and scraper-grazer and collector-gatherer insects emerged 60% and 55% more than channels without fish, likely benefiting from trout keeping mesopredators at bay. This experiment illustrates that prolonged low flows and invasions can profoundly alter mountain river food webs even when operating additively; and shows how mesocosm-based research may help understand global-change driven disruption of cross-ecosystem linkages.

ecology↗

bioRxiv2024

Eco-evolutionary consequences of selective exploitation on metapopulations illustrated with Atlantic salmon

While the eco-evolutionary consequences of dispersal and exploitation are increasingly recognized, consideration of these effects and how they interact for management and conservation remains limited. We addressed this gap by examining population exploitation within a metapopulation framework, using Atlantic salmon as a case study. We compared eco-evolutionary consequences of alternative exploitation strategies by incorporating selective exploitation based on life history traits and spatial dimension of exploitation (i.e., whether populations were net exporter or importer of individuals). We used a demo-genetic agent-based model to examine demographic and evolutionary consequences of these strategies across a gradient of population-specific exploitation rates. At the metapopulation scale, we found both lower abundance and earlier sexual maturation with increasing exploitation, particularly when fishing was selective on larger individuals. The spatial selectivity of exploitation had an overall additional detrimental effect on metapopulation performance and fisheries yield, and induced stronger evolutionary changes than when exploitation was evenly spread over all populations. We discuss the implications of metapopulation functioning for species management and how considering dispersal patterns and intensity might change how we apply harvest. Nevertheless, our findings suggest that the safest approach remains to distribute exploitation efforts evenly across all populations, especially in the absence of variation in intrinsic productivity and with the dispersal rates and spatial configuration simulated. However, this strategy might not completely prevent negative consequences at the local scale. Therefore, we advise managers to critically assess the relevance of our results and dispersal assumptions in the specific cases they may have to deal with.

ecology↗

bioRxiv2024

Dispersal and gene flow in anadromous salmonids: a systematic review

Dispersal is a ubiquitous ecological process that has been extensively studied in many plants and animals. Anadromous salmonids are an interesting system for examining dispersal, in part because of their well-known philopatric behavior, but also because of the conservation challenges related to the dispersal of hatchery-origin fish. Building on earlier work, we provide an updated systematic review of dispersal and gene flow in anadromous salmonids. In particular, we compared studies on dispersal of anadromous salmonids from wild and hatchery origins, including studies providing estimates of dispersal rates, observations of dispersal, and results from modelling studies. We reviewed 228 studies and found these were unevenly distributed among species, with Atlantic salmon, Chinook salmon, and sea trout being well-represented. Our results showcase considerable variability in estimated dispersal rates within and across studies, which is likely related to the different methodologies, dispersal propensities across species and populations, and spatial extents considered. Overall, our results confirmed a higher tendency of hatchery fish to disperse relative to wild fish, but we also found some variation across species that warrants further study. Moreover, we found that dispersal propensity tended to decline exponentially with distance, and that the drivers of dispersal varied considerably among studies. Additionally, we highlight various facets of dispersal captured across this suite of studies, including variation in terminology, methods and metrics for characterizing dispersal, and the spatio-temporal scales considered. Finally, our review revealed that few studies considered, and even fewer assessed, the implications of dispersal for the conservation and management of anadromous salmonids.

ecology↗