Biology subjects

Buckner, J. C.

Publications and source records attributed to Buckner, J. C..

4 recordsLinked to original sources

bioRxiv2025

Geometric morphometrics enables accurate predictions of paleoecology and reveals unique adaptations to an expanded niche space in extinct waterfowl

Establishing the relationships between organismal phenotypes and their environment is a key component to understanding evolutionary history. Comparative evaluations of extant and extinct species can reveal how lineages have adapted to changing environmental conditions over time. However, the understanding of paleoecologies is predicated on a robust understanding of how modern species have been shaped by adaptation. Waterfowl may present an ideal group to study adaptive evolution as much of their morphology is apparently shaped by their dietary ecology. Here we use a large geometric morphometric dataset of waterfowl combined with random forest, a supervised machine learning algorithm, and linear discriminate analysis, to predict the dietary ecologies of nine extinct waterfowl species. We find that both model types reliably predict ecology for extinct species with well-established diets. Interestingly, we also found that the Hawaiian moa-nalo and the New Zealand Cnemiornis calcitrans likely occupied ecological niches no longer present in modern waterfowl as they were not morphologically or ecologically convergent with modern geese as previously asserted. Our study demonstrates that waterfowl are an excellent model group for the study of adaptive evolution, and underscores the utility of predictive modelling for paleontological studies.

evolutionary biology↗

bioRxiv2024

Dietary specialization drives adaptation, convergence, and integration across the cranial and appendicular skeleton in Waterfowl (Anseriformes).

Convergence provides strong evidence for adaptive evolution as it reflects shared adaptive responses to the same selection pressures. The waterfowl (order Anseriformes) are an ideal group in which to study convergent evolution as they have repeatedly evolved morphotypes putatively correlated with diet (i.e., dabbler, grazer, diver). Here, we construct the most robust evolutionary hypothesis to date for waterfowl and reveal widespread morphological convergence across the order. We quantified the shape of the skull and hindlimb elements (femur, tibiotarsus, and tarsometatarsus) of 118 species of extant waterfowl using geometric morphometrics. Multivariate generalized evolutionary models provide strong support for a relationship between dietary ecology and skull shape, and evidence for convergent evolution across lineages that share dietary niches. Foraging behavior better explained the evolution of hindlimb shape, but diet still contributed significantly. We also find preliminary evidence for integration across all three measured hindlimb elements with each other and with the skull. We demonstrate that dietary ecology drives morphological convergence within waterfowl, that this convergent evolution involves multiple integrated skeletal structures, and that morphological changes are associated with shifts in the rate of phenotypic evolution.

evolutionary biology↗

bioRxiv2024

MHC heterozygosity may increase subordinate but not alpha male siring success in white-faced capuchin monkeys (Cebus imitator)

The genes of the major histocompatibility complex (MHC) are vital to vertebrate immunity and may influence mate choice in several species. The extent to which the MHC influences female mate choice in primates remains poorly understood, and studies of MHC-based mate choice in platyrrhines are especially rare. White-faced capuchin monkeys (Cebus imitator) reside in multimale-multifemale groups where alpha males sire most of the offspring. In this study, we investigated the roles of social dominance, relatedness, and MHC genotypes in determining which mating pairs produced offspring in wild white-faced capuchins in the Sector Santa Rosa (SSR), Area de Conservacion Guanacaste, Costa Rica. We find that males in this population do not differ significantly in MHC metrics based on their social status or siring success. Using mixed conditional logit models and generalized linear models, we find that alpha males that are distantly related to reproducing females are significantly more likely to sire offspring while MHC metrics do not predict the probability of siring offspring, or becoming an alpha male. However, we do find some evidence that subordinate males heterozygous at MHC loci sire significantly more offspring than homozygous subordinates. Further, one-sided binomial simulations reveal that offspring are more frequently heterozygous at MHC loci than expected given the gene pool. We conclude that in this population with limited genomic variation, females may preferentially mate with MHC-diverse subordinate males when related to the alpha, leading to increased probabilities of MHC-diverse offspring.

evolutionary biology↗

bioRxiv2021

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

Spiny-rayed fishes (Acanthomorpha) dominate modern marine habitats and comprise more than a quarter of all living vertebrate species1-3. It is believed that this dominance resulted from explosive lineage and phenotypic diversification coincident with the Cretaceous-Paleogene (K-Pg) mass-extinction event4. It remains unclear, however, if living acanthomorph diversity is the result of a punctuated burst or gradual accumulation of diversity following the K-Pg. We assess these hypotheses with a time-calibrated phylogeny inferred using ultraconserved elements from a sampling of species that represent over 91% of all acanthomorph families, as well as an extensive body shape dataset of extant species. Our results indicate that several million years after the end-Cretaceous, acanthomorphs underwent a prolonged and significant expansion of morphological disparity primarily driven by changes in body elongation, and that acanthomorph lineages containing the bulk of the living species diversity originated throughout the Cenozoic. These acanthomorph lineages radiated into distinct regions of morphospace and retained their iconic phenotypes, including a large group of laterally compressed reef fishes, fast-swimming open-ocean predators, bottom-dwelling flatfishes, seahorses, and pufferfishes. The evolutionary success of spiny-rayed fishes is the culmination of a post K-Pg adaptive radiation in which rates of lineage diversification were decoupled from periods of high phenotypic disparity.

evolutionary biology↗