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Biology subjects

Brabcova, V.

Publications and source records attributed to Brabcova, V..

4 recordsLinked to original sources

Forest biodiversity benefits from warmer microclimate, but only in colder regions

The diversity of many forest-dwelling organisms depends on forest structure, but it remains unknown to which degree this is mediated by microclimatic temperature, and whether microclimatic buffering is universally beneficial for forest biodiversity. In 234 broad-leaved forest plots across nine climatically differing regions in Germany, we measured micro- and macroclimatic temperatures, canopy cover, and deadwood volume after experimental manipulations of forest structure through thinning operations and gap cuts. We surveyed 21 taxonomic groups, representing plants, bacteria, fungi, and animals, to assess how their diversity depended on the predictors. Multi-taxon diversity, and diversity of ten separate taxonomic groups, increased from closed to open canopies. Only necrophagous beetles were more diverse in closed stands. These effects of canopy cover on diversity were partly mediated by microclimatic temperatures. Thereby, diversity responses to microclimatic temperature depended on the macroclimatic context. In regions with colder summers, locally warmer microclimates in canopy gaps had strong positive effects on biodiversity, while these effects were not found in regions with warmer summers. Consequently, management strategies aimed at multi-taxon forest diversity conservation should be chosen based on the regional climate, favoring canopy gaps primarily in colder regions, and taking future climate warming into consideration.

ecology↗

Experimentally manipulating forest structure to mimic management strategies: effects on deadwood fungal diversity and related ecosystem processes

Understanding the relationships between forest management, biodiversity, and ecosystem processes is necessary for achieving multifunctionality. Deadwood fungi are extremely diverse and important for carbon turnover in forests. However, how forest structure, resulting from management, affects deadwood fungal diversity and decomposition is not well known. We experimentally tested the effects of microclimate (via canopy cover) and deadwood enrichment (snags, logs, tree crowns, and habitat trees) on fungal diversity. Further, we assessed the effects of the treatments and fungal diversity on wood mass loss. We characterized the fungal communities of Fagus sylvatica (European beech) and Pinus sylvestris (Scots pine) deadwood via metabarcoding and measured wood mass loss after 3 years. We found that the host tree species was more important than canopy cover or deadwood enrichment for fungal alpha and beta diversity. Fungal alpha diversity of beech was mainly related to canopy cover; diversity of beech was higher under closed canopies. While alpha diversity of pine was related only to deadwood enrichment as diversity increased where habitat trees and crowns remained. Furthermore, while mass loss of beech was significantly higher in patches where trees were removed and patches where crowns remained, pine mass loss was neither affected by canopy cover nor deadwood enrichment. Host tree diversity is more important than environmental variability as a determinant of fungal diversity, underpinning the importance of maintaining diverse hosts in forests. However, contrasting diversity and decomposition effects between beech and pine suggest the need for forest management strategies tailored to tree species to maintain fungal diversity and ecosystem processes.

ecology↗

Enhancing experimentally the structural heterogeneity of forests increase soil fungal diversity but functional lifestyles in contrasting ways

Fungal communities in soils are highly diverse both in species and functions forming a major backbone of forest ecosystems. Recent observational high-throughput-sequencing studies have shown that fungal diversity is correlated with resource availability and climate across different spatial scales. However, the underlying mechanisms remain poorly understood. Across Germany, we experimentally manipulated 11 typically homogeneous, broadleaf production forests to increase their between-patch-heterogeneity (ESBC) and compared them with a control forest. In specific, we enhanced light availability via canopy openness and deadwood resources in the ESBC treatments. Fungal communities were determined by metabarcoding at 234 patches and analysed using a novel meta-analytical approach for pairwise comparisons of taxonomic and phylogenetic diversity along Hill numbers. We hypothesized that {gamma}-diversity is primarily driven by {beta}-diversity increasing with canopy mediated microclimate variability and secondarily by -diversity increasing with resource availability. Furthermore, we expected an increase in {gamma}-diversity by unique phylogenetic lineages supporting the insurance hypothesis. Our results showed a significant increase in {gamma}-diversity in ESBC forests, first by - and second by {beta}-diversity, both of which were influenced mainly by microclimate and not resource availability. The increase of phylogenetic diversity with ESBC was weak indicating functional similarity of species. Analysis of symbiotic, saprotrophic and parasitic fungal assemblages revealed contrasting effects of resource availability and microclimate across the scales. As in the UN Decade of Ecosystem Restoration many forest managers aim to increase the heterogeneity of forests and are simultaneously face rising tree mortality, our study provides first robust empirical evidence for the varying effects of forest gaps and deadwood on fungal diversity across -, {beta}-, {gamma}-scales for this major kingdom.

ecology↗

GlobalFungi: Global database of fungal records from high-throughput-sequencing metabarcoding studies

Fungi are key players in vital ecosystem services, spanning carbon cycling, decomposition, symbiotic associations with cultural and wild plants and pathogenicity. The high importance of fungi in the ecosystem processes contrasts with the incompleteness of understanding of the patterns of fungal biogeography and the environmental factors that drive it. To close this gap of knowledge, we have here collected and validated data published on the composition of soil fungal communities in terrestrial environments including soil and plant-associated habitats and made them publicly accessible through a user interface at http://globalfungi.com. The GlobalFungi database contains over 650 million observations of fungal sequences across >20 000 samples with geographical locations and additional metadata contained in 207 original studies with millions of unique sequence variants of the fungal internal transcribed spacers (ITS) 1 and 2 representing fungal species and genera. As it is, the study represents the most comprehensive atlas of fungal distribution on the global scale open to further additions.

ecology↗