Biology subjects

Bourke, A. F. G.

Publications and source records attributed to Bourke, A. F. G..

5 recordsLinked to original sources

bioRxiv2025

Characterizing the Genome of the Bumblebee Bombus haematurus: A Range-Expanding Pollinator

Over the past two decades, the blood-tailed bumblebee Bombus haematurus has expanded its range from Western Asia into Central Europe. It is among several members of the Pyrobombus subgenus of bumblebees to have undergone recent population expansions. A number of studies have investigated these other species for genomic signatures that might be associated with expansions. Currently there are no published studies describing whole genome resources for B. haematurus and no whole genome data from regions near the edge of the expanding front. Here, we sequenced samples of B. haematurus from part of its recently expanded range in Northern Italy to generate the first whole genome data for this species. The genome size of B. haematurus is in a similar range to that reported for closely related Pyrobombus species ([~]300 mega base pairs), with a predicted [~] 13,500 genes. At the location sampled, there was a comparatively low nucleotide diversity, low inbreeding evidenced through a negative inbreeding coefficient, FIS (-0.14), and low percentage of genome covered by long runs of homozygosity, LROH ([~]0.03%), compatible with a recent history of population expansion. Using nucleotide diversity and Tajimas D, we also detected evidence of positive and balancing selection in developmental biology and signalling genes. Comparison with other members of the Bombus genus and Pyrobombus subgenus revealed similar biological processes to be associated with signatures of selection across the genus. Our comparison also identified similar trends of FIS and LROH between B. haematurus and other Pyrobombus species.

genomics↗

bioRxiv2024

Female fruit flies use social cues to make egg clustering decisions

BackgroundThe ability to respond plastically to environmental variation is a key determinant of fitness. Females may use cues to strategically place their eggs, for example adjusting the number or location of eggs according to whether other females are present, driving the dynamics of local competition or cooperation. The expression of plasticity in egg laying patterns within individual patches, i.e., in contact clusters or not, represents an additional, under-researched and potentially important opportunity for fitness gains. Clustered eggs might benefit from increased protection or defence, and clustering could facilitate cooperative feeding. However, increased clustering is also expected to increase the risk of over-exploitation through direct competition. These potential benefits and costs likely covary with the number of individuals present, hence egg clustering behaviour within resource patches should be socially responsive. We investigate this new topic using the fruit fly Drosophila melanogaster. ResultsOur mathematical model, parameterised by data, verified that females cluster their eggs non-randomly, and increase clustering as group size increases. We also showed that, as the density of adult females increased, females laid more eggs, laid them faster, and laid more eggs in clusters. Females also preferred to place eggs within existing clusters. Most egg clusters were of mixed maternity. ConclusionsCollectively, the results reveal that females actively express plasticity in egg clustering according to social environment cues and prefer to lay in clusters of mixed maternity, despite the potential for increased competition. These findings are consistent with egg clustering plasticity being selected due to public goods-related benefits.

animal behavior and cognition↗

bioRxiv2024

Female oviposition decisions are influenced by the microbial environment

In ovipositing animals, egg placement decisions can be key determinants of offspring survival. One oviposition strategy reported across taxa is egg clustering, whereby a female lays multiple eggs next to one another or next to the eggs of other females. The fitness benefits of egg clustering, especially in mixed maternity clusters, are unknown. In some species, mothers provision eggs with diffusible defence compounds, such as antimicrobials, raising the possibility of public good benefits arising from egg clustering. Here we report that Drosophila melanogaster females frequently lay eggs in mixed maternity clusters. We tested two hypotheses for potential drivers of this oviposition behaviour: (i) the microbial environment affects fecundity and egg placement in groups of D. melanogaster females; (ii) D. melanogaster eggs exhibit antimicrobial activity. The results partially supported the first hypothesis. Females exposed to environmental microbes that naturally colonised the oviposition substrates in the absence of antimicrobial preservatives reduced their levels of fecundity but did not significantly alter egg clustering. In contrast, the presence of commensal (fly-associated) microbes did not affect oviposition. The second hypothesis was not supported. There was no evidence of antimicrobial activity, either in whole eggs or in soluble surface material extracted from them. In conclusion, while there was no evidence that oviposition decisions are shaped by the opportunity to share antimicrobials, there is evidence that the microbial environment provides cues that females use to make sophisticated decisions on fecundity and egg placement.

evolutionary biology↗

bioRxiv2023

Developmental diet alters the fecundity-longevity relationship and age-related gene expression in Drosophila melanogaster

The standard evolutionary theory of ageing predicts a negative relationship (trade-off) between fecundity and longevity. However, this relationship can become positive: (i) under the influence of longevity-enhancing mutations; (ii) when individuals have unequal resources; and (iii) in eusocial insects, in which reproductive queens outlive less- or non-reproductive workers. Developmental diet is likely to be central to determining trade-offs as it affects key fitness traits such as adult body size, but its exact role remains uncertain. For example, in Drosophila melanogaster fruit flies, changes in adult diet can affect fecundity, longevity, and gene expression throughout life, but it is unknown how changes in developmental (larval) diet affect fecundity-longevity relationships or gene expression in adults. Using D. melanogaster, we therefore tested the hypothesis that variation in developmental diet alters the directionality of fecundity-longevity relationships in adults, and characterised associated gene expression changes. We reared D. melanogaster larvae on low (20%), medium (100%), and high (120%) SYA (Sugar Yeast Agar) diets, and transferred adult females developing from these larvae to a common (110% SYA) adult diet. We measured life-time fertility (realised fecundity) and longevity of individual adult females and, using mRNA-seq, profiled gene expression changes across two time-points. Adult females raised on the different larval diets exhibited fecundity-longevity relationships that were significantly different in directionality, i.e., varied from positive to negative, despite minimal differences in mean life-time fertility or longevity. Treatments also differed in age-related gene expression, including expression of genes known to be associated with ageing. Hence, this study shows that the sign of fecundity-longevity relationships in adult insects can be altered and even reversed by variation in larval diet quality. Furthermore, larval diet quality may be a key mechanistic factor underpinning positive fecundity-longevity relationships observed in species such as eusocial insects.

evolutionary biology↗

bioRxiv2022

Eusocial insect queens show costs of reproduction and transcriptomic signatures of reduced longevity

Eusocial insect queens have been suggested to be counter-examples to the standard evolutionary theory of ageing through lacking costs of reproduction. Using the bumblebee (Bombus terrestris), we tested this hypothesis experimentally against the alternative that costs of reproduction exist in eusocial insect queens, but are latent, resulting in the positive fecundity-longevity relationship typically found in unmanipulated queens. We experimentally increased queens costs of reproduction by removing their eggs, which causes queens to increase their egg-laying rate. Treatment queens had significantly reduced longevity relative to control queens whose egg-laying rate was not increased. In addition, treatment and control queens differed in age-related gene expression based on mRNA-seq in both their overall expression profiles and the expression of ageing-related genes. Remarkably, this occurred principally with respect to relative age, not chronological age. These results provide the first simultaneously phenotypic and transcriptomic experimental evidence of costs of reproduction in queens of eusocial insects and suggest how the genetic pathways underpinning ageing might become remodelled during eusocial evolution.

evolutionary biology↗