Biology subjects

Bhullar, B.-A. S.

Publications and source records attributed to Bhullar, B.-A. S..

4 recordsLinked to original sources

bioRxiv2025

Limb proportions predict aquatic habits and soft-tissue flippers in extinct amniotes

IN BRIEFGordon et al. use a phylogenetic machine-learning approach incorporating linear and geometric morphometric analyses (including >11,000 original linear measurements) to characterize osteological correlates of interdigital webbing, soft-tissue flippers, and aquatic habits in amniotes. They find that relative hand length can reconstruct soft-tissue phenotypes and aquatic habits in extinct amniotes with >90% accuracy, enabling a more phylogenetically comprehensive investigation of limb evolution among bona fide aquatic and terrestrial species. This investigation reveals distinct morphometric landscapes for limb evolution in mammals and reptiles and clarifies the aquatic habits of multiple extinct groups with historically ambiguous ecologies. In addition, it debuts a versatile supervised machine-learning approach for reconstructing cryptic phenotypes from fossil material. O_FIG O_LINKSMALLFIG WIDTH=198 HEIGHT=200 SRC="FIGDIR/small/661573v1_ufig1.gif" ALT="Figure 1"> View larger version (83K): org.highwire.dtl.DTLVardef@38ca68org.highwire.dtl.DTLVardef@708fb4org.highwire.dtl.DTLVardef@1eaa6f6org.highwire.dtl.DTLVardef@7795c6_HPS_FORMAT_FIGEXP M_FIG C_FIG HIGHLIGHTSO_LIForelimb proportions reliably predict soft-tissue flippers and highly/fully aquatic habits with >90% accuracy across amniotes. C_LIO_LIInterdigital webbing cannot be predicted from the bones alone using previously suggested correlates. C_LIO_LIAll Paleozoic marine reptiles known to date lived at most an amphibious lifestyle, regularly voyaging onto land. C_LIO_LIPhylogenetic Receiver-Operating Characteristic (ROC) analysis effectively reconstructs cryptic phenotypes in extinct species. C_LI

paleontology↗

bioRxiv2022

Sinking a giant: quantitative macroevolutionary comparative methods debunk qualitative assumptions

Myhrvold et al.1 suggest that our inference of subaqueous foraging among spinosaurids2 is undermined by selective bone sampling, inadequate statistical procedures, and use of inaccurate ecological categorizations. Myhrvold et al.1 ignore major details of our analyses and results, and instead choose to portray our inferences as if they were based on qualitative interpretations of our plots, without providing additional analyses to support their claims. In this manuscript, we thoroughly discuss all the concerns exposed by Myhrvold et al.1. Additional analyses based on our original datasets2 and novel data presented by Myhrvold et al.1 do not change our original interpretations: while the spinosaurid dinosaurs Spinosaurus and Baryonyx are recovered as subaqueous foragers, Suchomimus is inferred as a non-diving animal.

paleontology↗

bioRxiv2022

40 new specimens of Ichthyornis provide unprecedented insight into the postcranial morphology of crownward stem group birds.

Ichthyornis has long been recognized as a pivotally important fossil taxon for understanding the latest stages of the dinosaur-bird transition, but little significant new postcranial material has been brought to light since initial descriptions of partial skeletons in the 19th Century. Here, we present new information on the postcranial morphology of Ichthyornis from 40 previously undescribed specimens, providing the most detailed morphological assessment of Ichthyornis to date. The new material includes four partially complete skeletons and numerous well-preserved isolated elements, enabling new anatomical observations such as muscle attachments previously undescribed for Mesozoic euornitheans. Among the elements that were previously unknown or poorly represented for Ichthyornis, the new specimens include an almost-complete axial series, a hypocleideum-bearing furcula, radial carpal bones, fibulae, a complete tarsometatarsus bearing a rudimentary hypotarsus, and one of the first-known nearly complete three-dimensional sterna from a Mesozoic avialan. Several pedal phalanges are preserved, revealing a remarkably enlarged pes presumably related to foot-propelled swimming. Although diagnosable as Ichthyornis, the new specimens exhibit a substantial degree of morphological variation, some of which may relate to ontogenetic changes. Phylogenetic analyses incorporating our new data and employing alternative morphological datasets recover Ichthyornis stemward of Hesperornithes and Iaceornis, in line with some recent hypotheses regarding the topology of the crownward-most portion of the avian stem group, and we establish phylogenetically-defined clade names for relevant avialan subclades to help facilitate consistent discourse in future work. The new information provided by these specimens improves our understanding of morphological evolution among the crownward-most non-neornithine avialans immediately preceding the origin of crown group birds.

paleontology↗

bioRxiv2020

Hidden limbs in the limbless skink Brachymeles lukbani: developmental observations

Reduced limbs and limblessness have evolved independently in many lizard clades. Skinks exhibit a wide range of limb-reduced morphologies, but only some species have been used to study the embryology of limb reduction (i.g., digit reduction in Chalcides and limb reduction in Scelotes). The genus Brachymeles, a Southeast Asian clade of skinks, includes species with a range of limb morphologies, from pentadactyl to functionally as well as structurally limbless species. Adults of the small, snake-like species Brachymeles lukbani show no sign of external limbs in the adult except for small depressions where they might be expected to occur. Embryos of B. lukbani in early stages of development, on the other hand, show a truncated but well-developed limb with a stylopod and a zeugopod, but no signs of an autopod. As development proceeds, the limbs small size persists even while the embryo elongates. These observations are made based on external morphology. We used florescent whole-mount immunofluorescence to visualize the morphology of skeletal elements and muscles within the embryonic limb of B. lukabni. Early stages have a humerus and separated ulna and radius cartilages; associated with these structures are dorsal and ventral muscle masses as those found in the embryos of other limbed species. While the limb remains small, the pectoral girdle grows in proportion to the rest of the body, with well-developed skeletal elements and their associated muscles. In later stages of development, the small limb is still present under the skin but there are few indications of its presence, save for the morphology of the scale covering it. The adult morphology consists of a well-developed pectoral girdle, small humerus, extremely reduced ulna and radius, and well-developed limb musculature connected to the pectoral girdle. These muscles form in association with a developing limb during embryonic stages, a hint that "limbless" lizards that possesses these muscles may have or have had at least transient developing limbs, as we find in B. lukbani. Overall, the observed pattern of ontogenetic reduction, leading to an externally limbless adult in which a limb rudiment is hidden and covered under the trunk skin, is a situation called cryptomelia. The results of this work add to our growing understanding of clade-specific patterns of limb reduction and the convergent evolution of limbless phenotypes through different developmental processes.

evolutionary biology↗