Besson, D. | Search bioRxiv

bioRxiv2024

High δ15N values in Predynastic Egyptian archeological remains: A potential indicator for localised soil fertilisation practices in extreme conditions

Predynastic Egypt arose around 5700 BC when nomadic people settled in the Nile Valley. Without voluntary practice related to anthropic mummification, as will be seen with the Egyptian Dynastic empires, human remains from this period were naturally mummified because of the natural environmental conditions, possibly enveloped in plant mats and animal skins. This study focuses on four mummies from the Natural History Museum of Musee des Confluences in Lyon (France). The geographic origin of the mummies and climatic conditions at that time were deduced from o18O measurements on teeth and bones. These measurements confirm that the primary source of drinking water was the Nile, and that one mummy of unknown origin also originated from Upper Egypt like the other three. The diet and life habits of these individuals were inferred from carbon (o13C), nitrogen (o15N) and sulfur (o34S) isotope compositions of their skins and bone collagens. Our study is of particular interest as we were able to analyse the animal skins and plant material enveloping the mummies using the same isotopic systems. The mean o15N values obtained in human skins (17.9{+/-}2.4{per thousand}, AIR) were found to be high, and consistent with the values measured in animal skins (16.0{+/-}2.9{per thousand}, AIR). The analysed plants have even higher values, with an average of 22.1{+/-}2.2{per thousand}, AIR. The most probable explanation for the markedly elevated {delta}15N values observed in all the materials investigated is localised soil amendment practices. This is corroborated by the consistent nitrogen isotopic signatures across all the examined tissues, with a notable prevalence in plant tissues.

ecology↗

bioRxiv2024

TORC1-dependent control of fission yeast cohesin

Cohesin is a DNA tethering complex essential for chromosome structure and function. In fission yeast, defects in the cohesin loader Mis4 result in chromosome segregation defects and dysregulated expression of genes near chromosome ends. A genetic screen for suppressors of the thermosensitive growth defect of mis4-G1487D identified several hypomorphic mutants of the Target of Rapamycin Complex 1 (TORC1), a conserved kinase that integrates cellular signals to regulate growth and metabolism through substrate-specific phosphorylation. Here, we demonstrate that the TORC1 pathway modulates cohesin functions in chromosome segregation and gene expression. In the context of compromised cohesin loading, the incidence of chromosome segregation defects was modulated by the growth medium in a TORC1-dependent manner. Pharmacological or genetic down-regulation of TORC1 activity restored cohesin binding to its chromosomal sites and improved mitotic chromosome segregation. Notably, reduced TORC1 activity also increased cohesin binding and chromosome transmission fidelity in wild-type cells. These results suggest that environmental cues influence chromosome stability via TORC1. Biochemically, TORC1 co-purified with cohesin and reduced TORC1 activity correlated with decreased phosphorylation of specific residues on Mis4 and cohesin. Mutations in cohesin that mimic the non-phosphorylated state mirrored the effects of TORC1 downregulation, showing that TORC1 is part of the network that controls cohesin phosphorylation to modulate its functions. Finally, we show that the functional interaction between TORC1 and Mis4 extends to the regulation of stress-responsive genes. Our findings reveal a TORC1-cohesin link that may facilitate cellular adaptation to environmental changes. Given that TORC1 inhibitors and calorie restriction extend lifespan in diverse species, this connection raises the intriguing possibility that cohesin-mediated changes in chromosome structure contribute to these effects.

molecular biology↗