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Biology subjects

Bernal, S.

Publications and source records attributed to Bernal, S..

2 recordsLinked to original sources

Lake ecosystem responses to runoff variability across time and space

Inland waters in the Northern Hemisphere are experiencing increased annual runoff due to higher overall precipitation as well as intensified short-term events such as heavy rainfall, floods and storms. These events affect the total loading and variability of inputs of allochthonous, coloured dissolved organic matter (cDOM) and inorganic nutrients into lakes. Previous studies have shown that increased total cDOM and inorganic nutrient loads affect phytoplankton biomass and metabolic rates, but it is unknown how the effects of different cDOM and nutrient pulse scenarios are modified by spatial and seasonal differences in lake characteristics. Here, we conducted a coordinated, standardized mesocosm experiment across three lakes with different ambient cDOM and nutrient concentrations. In two of these lakes, the experiment was implemented in two seasons. The same total amounts of cDOM, nitrate and phosphate were added to all mesocosms, but in pulses that differed in intensity and frequency. We found that pulse intensity and frequency affected chlorophyll a and phycocyanin concentrations and metabolic rates, i.e. gross primary production and respiration, differently. Specifically, more pronounced effects were found in response to the extreme pulse scenario compared to those with more frequent, smaller pulse additions. Furthermore, the effects were mainly temporary and varied more among lakes than between seasons. The clearest differences between the extreme and more gradual runoff scenarios were found in the lake with the lowest background cDOM and nitrate concentrations, likely because lower light limitation and possibly stronger initial N-limitation caused a faster response to the nutrient addition. Our results highlight that both antecedent lake conditions and characteristics of runoff events can affect phytoplankton biomass and metabolic rates and that comparative experimental approaches are needed to reveal the complexity of the responses.

ecology↗

Proviruses in CD4+ T cells reactive to autologous antigens contribute to nonsuppressible HIV-1 viremia

Antiretroviral therapy (ART) halts HIV-1 replication, reducing plasma virus levels to below the limit of detection, but it is not curative due to a reservoir of latently infected CD4+ T cells. In some people living with HIV-1 (PLWH), plasma HIV-1 RNA becomes persistently detectable despite optimal ART. This nonsuppressible viremia (NSV) is characterized by identical, non-evolving HIV-1 RNA variants expressed from infected CD4+ T cell clones. The mechanisms driving persistent virus production from a specific population of infected cells are poorly understood. We hypothesized that proviruses in cells responding to chronic immunologic stimuli, including self-associated antigens, may drive viral gene expression and NSV. Here, we demonstrate that stimulation of CD4+ T cells with autologous cell lysates induces virus production in an MHC-II-dependent manner. In 7 of 8 participants with NSV, we recovered viral RNA released ex vivo in response to autologous cell lysates that matched plasma virus. This process involves both defective and replication-competent proviruses residing in conventional T cells, and is also observed in PLWH with undetectable viremia. These findings suggest that recognition of self-associated antigens is an important cause of HIV-1 reservoir expression, which can contribute to persistent systemic inflammation and potential rebound upon ART interruption. One sentence summaryHIV-1 viremia not suppressed by effective ART can be caused by proviruses in CD4+ T cells reactive to autologous antigens.

immunology↗