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Biology subjects

Beltran, R. S.

Publications and source records attributed to Beltran, R. S..

3 recordsLinked to original sources

Large language models unlock the ecology of species interactions

Species interactions shape population dynamics, geographic distributions, evolutionary trajectories, and responses to environmental change. Yet data on these interactions remain scarce across broad spatial, temporal, and taxonomic scales because they are difficult to collect in the field. One promising source of interaction data is citizen science platforms, which contain billions of biodiversity observations, often accompanied by unstructured text comments that may document interactions among organisms. Advances in large language models (LLMs) make it increasingly feasible to identify, extract, and categorize biotic interactions from these unstructured data at scale. Here, we present an LLM workflow that collects species interaction observations from multilingual citizen science comments. Using two case studies--bird-bird and plant-pollinator interactions--we show that LLMs can rapidly extract interaction types and participating species with high accuracy. These data can greatly expand the spatial, temporal, and taxonomic coverage and resolution of species interactions data, enable new tests of long-standing ecological questions, and improve our ability to track ecological changes. With appropriate validation, expert review, and attention to data privacy for both users and sensitive species, this approach opens new opportunities to characterize, forecast, and conserve biodiversity under global change.

ecology↗

Accuracy and precision of citizen scientist animal counts from drone imagery

Repeated counts of animal abundance can reveal changes in local ecosystem health and inform conservation strategies. Unmanned aircraft systems (UAS) such as drones are commonly used to photograph animals in remote locations; however, counting animals in images is a laborious task. Crowd-sourcing can reduce the time required to conduct these censuses considerably, but must first be validated against expert counts to measure sources of error. Our objectives were to assess the accuracy and precision of citizen science counts and make recommendations for future citizen science projects. We uploaded drone imagery from Ano Nuevo Island (California, USA) to a curated Zooniverse website that instructed citizen scientists to count seals and sea lions. Across 212 days, over 1,500 volunteers counted animals in 90,000 photographs. We quantified the error associated with several descriptive statistics to extract a single citizen science count per photograph from the 15 repeat counts and then compared the resulting citizen science counts to expert counts. Although proportional error was relatively low (9% for sea lions and 5% for seals during the breeding seasons) and improved with repeat sampling, the 12+ volunteers required to reduce error was prohibitively slow, taking on average 6 weeks to estimate animals from a single drone flight covering 25 acres, despite strong public outreach efforts. The single best algorithm was Median without the lowest two values, demonstrating that citizen scientists tended to under-estimate the number of animals present. Citizen scientists accurately counted adult seals, but accuracy was lower when sea lions were present during the summer and could be confused for seals. We underscore the importance of validation efforts and careful project design for researchers hoping to combine citizen science with drone imagery.

ecology↗

Birth timing after the long feeding migration in elephant seals

Northern elephant seals migrate long distances from feeding grounds to raise pups during a brief period on breeding beaches. Since gestation sets a parturition date months in advance, timing of the arrival must be precise. We used satellite-tracked animals to examine this timing, establishing arrival and birth dates in 106 migrating females and estimating how far they traveled in the days just before birth. Females arrived a mean of 5.5 days prior to birth (range 1-11, sd=1.6), and females arriving later in the breeding season cut that pre-birth interval by 1.8 days relative to early arrivers. There was no correlation between female body condition, nor female age, and the pre-birth interval. The last 15 days prior to birth, animals traveled as far as 1465 km. Those furthest from the colony traveled > 100 km per day, three times faster than animals near the colony at the same time. Despite migrations covering several thousand kilometers while pregnant, female elephant seals were able to time their arrival within 6 days, swimming steadily at high speed if needed. This allows them to maintain a precise annual cycle for many years consecutively.

animal behavior and cognition↗