Biology subjects

Bellet, M. E.

Publications and source records attributed to Bellet, M. E..

3 recordsLinked to original sources

bioRxiv2021

Prefrontal neural ensembles encode an internal model of visual sequences and their violations

When exposed to sensory sequences, do macaque monkeys spontaneously form abstract internal models that generalize to novel experiences? Here, we show that neuronal populations in macaque ventrolateral prefrontal cortex encode visual sequences by factorizing them into separate codes for the specific pictures presented and for their abstract sequential structure. Ventrolateral prefrontal neurons were recorded while macaque monkeys passively viewed visual sequences and sequence mismatches in the local-global paradigm. Even without any overt task or response requirements, prefrontal populations spontaneously built up representations of sequence structure, serial order, and image identity within distinct but superimposed neuronal subspaces. Representations of sequence structure rapidly updated following single exposure to a mismatch sequence, while orthogonal populations represent mismatches for sequences of different complexity. Finally, those representations generalized across sequences following the same structure but comprising different images. These results suggest that prefrontal populations spontaneously encode rich internal models of visual sequences that reflect both content-specific and abstract information.

neuroscience↗

bioRxiv2019

Using deep neural networks to detect complex spikes of cerebellar Purkinje Cells

One of the most powerful excitatory synapses in the entire brain is formed by cerebellar climbing fibers, originating from neurons in the inferior olive, that wrap around the proximal dendrites of cerebellar Purkinje cells. The activation of a single olivary neuron is capable of generating a large electrical event, called "complex spike", at the level of the postsynaptic Purkinje cell, comprising of a fast initial spike of large amplitude followed by a slow polyphasic tail of small amplitude spikelets. Several ideas discussing the role of the cerebellum in motor control are centered on these complex spike events. However, these events are extremely rare, only occurring 1-2 times per second. As a result, drawing conclusions about their functional role has been very challenging, as even few errors in their detection may change the result. Since standard spike sorting approaches cannot fully handle the polyphasic shape of complex spike waveforms, the only safe way to avoid omissions and false detections has been to rely on visual inspection of long traces of Purkinje cell recordings by experts. Here we present a supervised deep learning algorithm for rapidly and reliably detecting complex spikes as an alternative to tedious visual inspection. Our algorithm, utilizing both action potential and local field potential signals, not only detects complex spike events much faster than human experts, but it also excavates key features of complex spike morphology with a performance comparable to that of such experts. Significance statementClimbing fiber driven "complex spikes", fired at perplexingly low rates, are known to play a crucial role in cerebellum-based motor control. Careful interpretations of these spikes require researchers to manually detect them, since conventional online or offline spike sorting algorithms (optimized for analyzing the much more frequent "simple spikes") cannot be fully trusted. Here, we present a deep learning approach for identifying complex spikes, which is trained on local field and action potential recordings from cerebellar Purkinje cells. Our algorithm successfully identifies complex spikes, along with additional relevant neurophysiological features, with an accuracy level matching that of human experts, yet with very little time expenditure.

neuroscience↗

bioRxiv2018

Human-level saccade detection performance using deep neural networks

Saccades are ballistic eye movements that rapidly shift gaze from one location of visual space to another. Detecting saccades in eye movement recordings is important not only for studying the neural mechanisms underlying sensory, motor, and cognitive processes, but also as a clinical and diagnostic tool. However, automatically detecting saccades can be difficult, particularly when such saccades are generated in coordination with other tracking eye movements, like smooth pursuits, or when the saccade amplitude is close to eye tracker noise levels, like with microsaccades. In such cases, labeling by human experts is required, but this is a tedious task prone to variability and error. We developed a convolutional neural network (CNN) to automatically detect saccades at human-level performance accuracy. Our algorithm surpasses state of the art according to common performance metrics, and will facilitate studies of neurophysiological processes underlying saccade generation and visual processing.

neuroscience↗