Search bioRxiv⌕ Search

Biology subjects

Batista, I. C. A.

Publications and source records attributed to Batista, I. C. A..

2 recordsLinked to original sources

A shift in the pathotype diversity and complexity of Phytophthora sojae, causal agent of root and stem rot of soybean, in Brazil

Soybean root rot disease caused by the oomycete Phytophthora sojae is particularly destructive, once it is a host-specific pathogen that can infect and kill soybean plants at any stage of growth. The use of resistant cultivars is the most effective method of controlling the disease. Therefore, monitoring changes in the adaptability of P. sojae population to resistance genes (Rps) is extremely important not only from an epidemiological point of view but mainly for the management of the disease and durability of the Rps genes. We investigated the pathotypes of 40 isolates of P. sojae, sampled from the region with a higher incidence of soybean root rot in Brazil, using a set of 14 soybean differentials. The first study investigating pathotype diversity in Brazil was published in 2013. A decade later, we are reporting a major shift in pathotype diversity and complexity. This information can be useful for breeding programs aiming at developing soybean cultivars with resistance to root and stem rot and optimize the usage of genes and germplasm.

microbiology↗

The Brazilian population of Fusarium oxysporum f. sp. cubense is not structured by VCG or by geographic origin

Fusarium wilt, caused by the soil-borne fungus Fusarium oxysporum f. sp. cubense (Foc), is considered one of the most destructive diseases of bananas. Paradoxically, knowledge of the genetics of the pathogen population in the Americas is very limited. In this study, a collection of 178 monosporic isolates from several banana producing regions, located in different climatic zones along a South to North transect in Brazil, was formed to assess the genetic structure of the population of Foc. The isolates underwent pathogenicity tests, PCR diagnosis for the detection of Tropical race 4 and screening to SIX homologs. The VCG of 119 isolates was determined by pairing against 17 testers. A group of 158 isolates was selected for microsatellite genotyping. There was moderate diversity of Foc in Brazil. Eight VCGs were identified: 0120, 0122, 0124, 0125, 0128, 01215, 01220, and 01222, of which 78% of isolates belong to a single VCG, while 22% of isolates belong to complexes of VCGs. The distribution of VCGs is uneven and independent of the banana genotype. VCGs were correlated with homologs of the SIX genes and varied according to geographic regions. Four SSR loci were polymorphic and on average 7.5 alleles were detected per locus. Thirty-five multilocus genotypes (MLGs) were identified. There was no association between VCG and MLGs and no genetic structure of the population of Foc in Brazil was detected.

microbiology↗