Biology subjects

Bain, A.

Publications and source records attributed to Bain, A..

3 recordsLinked to original sources

bioRxiv2026

Distinct SMA beta bursts support the development of anticipatory postural control in children

To produce smooth and coordinated movements, the brain generates anticipatory postural adjustments (APA) - feedforward motor commands that counteract predicted postural disturbances before they occur. Although APA emerge early in life, their maturation extends into early adulthood, yet little is known about the underlying neural mechanisms. Using magnetoencephalography during a naturalistic bimanual load-lifting task, we investigated anticipatory postural control in children aged 7-12 years. In this task, lifting a load from the contralateral postural forearm induces upward elbow rotation, which is anticipatorily counteracted by inhibition of Biceps brachii postural activity, stabilizing forearm posture. Surprisingly, despite greater variability in inhibition timing and less efficient forearm stabilization in children, the mechanism of anticipatory inhibition was consistent with that recently described in adults: it was mediated by transient oscillatory beta bursts (19-24 Hz), associated with reduced supplementary motor area (SMA) excitability indexed by high-gamma (90-130 Hz) power suppression, and preceded by directed influences from lateral prefrontal and ventral premotor cortex. However, burst frequency was lower in children, and an additional APA mechanism was recruited: while 19-24 Hz bursts were linked to immediate SMA suppression and stronger muscle inhibition, higher-frequency bursts (24-29 Hz) were associated with delayed ([~]100 ms) SMA suppression mediated by alpha activity (8 Hz), which attenuated post-inhibition forearm instability. These results reveal that children in middle childhood already engage adult-like neural mechanisms for anticipatory inhibition, while additionally recruiting a compensatory mechanism to counteract postural imprecision, providing new insights into the neural basis of APA maturation and its alteration in neurodevelopmental conditions.

neuroscience↗

bioRxiv2024

Cardiovascular symptoms of PASC are associated with trace-level cytokines that affect the function of human pluripotent stem cell derived cardiomyocytes

Globally, over 65 million individuals are estimated to suffer from post-acute sequelae of COVID-19 (PASC). A large number of individuals living with PASC experience cardiovascular symptoms (i.e. chest pain and heart palpitations) (PASC-CVS). The role of chronic inflammation in these symptoms, in particular in individuals with symptoms persisting for >1 year after SARS-CoV-2 infection, remains to be clearly defined. In this cross-sectional study, blood samples were obtained from three different sites in Australia from individuals with i) a resolved SARS-CoV-2 infection (and no persistent symptoms i.e. Recovered), ii) individuals with prolonged PASC-CVS and iii) SARS-CoV-2 negative individuals. Individuals with PASC-CVS, relative to Recovered individuals, had a blood transcriptomic signature associated with inflammation. This was accompanied by elevated levels of pro-inflammatory cytokines (IL-12, IL-1{beta}, MCP-1 and IL-6) at approximately 18 months post-infection. These cytokines were present in trace amounts, such that they could only be detected with the use of novel nanotechnology. Importantly, these trace-level cytokines had a direct effect on the functionality of pluripotent stem cell derived cardiomyocytes in vitro. This effect was not observed in the presence of dexamethasone. Plasma proteomics demonstrated further differences between PASC-CVS and Recovered patients at approximately 18 months post-infection including enrichment of complement and coagulation associated proteins in those with prolonged cardiovascular symptoms. Together, these data provide a new insight into the role of chronic inflammation in PASC-CVS and present nanotechnology as a possible novel diagnostic approach for the condition.

microbiology↗

bioRxiv2020

Exploring systematic biases, rooting methods and morphological evidence to unravel the evolutionary history of the genus Ficus (Moraceae)

Despite their ecological and evolutionary importance as key components of tropical ecosystems, the phylogeny of fig trees is still unresolved. We use restriction-site-associated DNA (RAD) sequencing (ca 420kb) and 102 morphological characters to elucidate the relationships between 70 species of Ficus representing all known subgenera and sections and five outgroups. We compare morphological and molecular results to highlight discrepancies and reveal possible inference bias. We analyse marker and taxon properties that may bias molecular inferences, with existing softwares and a new approach based on iterative principal component analysis to reduce variance between clusters of samples. For the first time, with both molecular and morphological data, we recover a monophyletic subgenus Urostigma and a clade with all gynodioecious fig trees. However, our analyses show that it is not possible to homogenize evolutionary rates and GC content for all taxa prior to phylogenetic inference and that four competing positions for the root of the molecular tree are possible. The placement of the long-branched section Pharmacosycea as sister to all other fig trees is not supported by morphological data and considered as a result of a long branch attraction artefact to the outgroups. Regarding morphological features and indirect evidence from the pollinator tree of life, the topology that divides the genus Ficus into monoecious versus gynodioecious species appears most likely. Active pollination is inferred as the ancestral state for all topologies, ambiguity remains for ancestral breeding system including for the favored topology, and it appears most likely that the ancestor of fig trees was a freestanding tree. Increasing sampling may improve results and would be at least as relevant as maximizing the number of sequenced regions given the strong heterogeneity in evolutionary rates, and to a lesser extent, base composition among species. Despite morphological plasticity and frequent homoplasy of multiple characters, we advocate giving a central role to morphology in our understanding of the evolution of Ficus, especially as it can help detect insidious systematic errors that tend to become more pronounced with larger molecular data sets.

evolutionary biology↗