Biology subjects

Baffet, A.

Publications and source records attributed to Baffet, A..

5 recordsLinked to original sources

bioRxiv2026

The human-specific gene FRMPD2B couples postnatal experience to the expansion of cortical connectivity

The human neocortex is characterized by its uniquely prolonged postnatal developmental period during which experience sculpts neuronal circuits, a process essential to human cognitive abilities. Yet whether human-specific genetic innovations have shaped the activity-dependent mechanisms regulating circuit assembly remains unknown. Here, we identify the human-specific gene FRMPD2B as an activity- and experience-regulated modifier of cortical connectivity. FRMPD2B is primarily expressed in cortico-cortical projection neurons postnatally and throughout childhood. It promotes dendritic, axonal and synaptic development, and is required for proper morphogenesis in xenotransplanted human cortical neurons. FRMPD2B expression is bidirectionally regulated by neuronal activity and experience. This activity-responsiveness was gained after FRMPD2B arose through partial gene duplication, when a retrotransposon insertion remodeled its promoter. Our findings highlight how a series of genetic innovations have led to the emergence of a human-specific activity-regulated developmental program through which postnatal experience drives cortical connectivity expansion, linking genome evolution to human brain plasticity.

neuroscience↗

bioRxiv2025

Post-translational Tuning of Human Cortical Progenitor Neuronal Output

The striking expansion of the human neocortex is driven by the ability of radial glial cells (RGCs) to prolong neurogenesis without exhausting their progenitor pool, thereby producing more neurons, particularly in the upper layers. The mechanisms underlying enhanced human neurogenic output remain unresolved. We hypothesized that post-translational modification of conserved proteins could provide a flexible mechanism supporting species-specific patterns of neurogenesis. Here, we identify phosphorylation of the proneural factor NEUROGENIN2 as a regulator of human RGC neuronal output by modulating its pioneering-like activity, at the expense of its transactivation function. This, in turn, remodels the RGC chromatin landscape, resulting in a forward temporal shift of RGC gene regulatory networks and leading to increased neuronal production biased towards upper-layer neurons. Our work proposes a conceptual framework for how subtle modifications of conserved processes, and not just new genes, encode tunable mechanisms for species-specific trajectories of brain development.

developmental biology↗

bioRxiv2024

Lamins regulate nuclear mechanics and shape to control glioblastoma cell proliferation, migration and invasion

Glioblastoma (GBM) is known as the most aggressive brain tumor and is characterized by a high heterogeneity and a median patient survival time around 15 months. Phenotyping based on cell mechanics is increasingly recognized as a potential prognostic marker for tumor aggressiveness. We have previously shown that cell and nuclear mechanical properties vary between different grades of gliomas and may be used to differentiate between GBM of different aggressiveness. Here, we find that the levels of lamin proteins can serve as an indicator of GBM aggressiveness. In patient-derived GBM cell lines, we found that cells from different GBM express different lamin levels. Nuclear size correlates positively with the ratio between lamin A and lamin B1 while nuclear stiffness increases with the levels of both lamin A and lamin B1. A simple mechanical model suggests that lamin A and lamin B1 act like springs in series. We also show that cells proliferate faster in GBM cell lines expressing higher lamin A levels. Downregulating lamin A expression in these cells reverse the aggressive phenotype. In contrast with breast cancer cells for which reduced lamin A levels favor cell migration in a confined environment, increased levels of lamin A may facilitate the invasion of more aggressive GBM cell lines in the soft environment of the brain. Furthermore, since nuclear deformation is a hallmark of malignancy in cancer cells, our results suggest that nuclear shape and mechanics may serve as prognosis biomarkers for GBM.

biophysics↗

bioRxiv2022

A cell fate decision map reveals abundant direct neurogenesis in the human developing neocortex

The human neocortex has undergone strong evolutionary expansion, largely due to an increased progenitor population, the basal radial glial (bRG) cells. These cells are responsible for the production of a diversity of cell types, but the successive cell fate decisions taken by individual progenitors remains unknown. Here, we developed a semi-automated live/fixed correlative imaging method to generate a map of bRG cell division modes in early fetal tissue and cerebral organoids. Through the analysis of over 1,000 dividing progenitors, we show that bRG cells undergo abundant symmetric amplifying divisions, followed by frequent direct neurogenic divisions, bypassing intermediate progenitors. These direct neurogenic divisions are more abundant in the upper part of the subventricular zone. We furthermore demonstrate asymmetric Notch activation in the self-renewing daughter cells, independently of basal fiber inheritance. Our results reveal a remarkable conservation of fate decisions in cerebral organoids, supporting their value as models of early human neurogenesis.

developmental biology↗

bioRxiv2020

Endosomal trafficking defects alter neural progenitor proliferation and cause microcephaly

Primary microcephaly and megalencephaly are severe brain malformations defined by reduced and increased brain size, respectively. Whether these two pathologies arise from related alterations at the molecular level is unclear. Microcephaly has been largely associated with centrosomal defects, leading to cell death. Here, we investigated the consequences of WDR81 loss of function, which cause severe microcephaly in patients. We show that WDR81 regulates endosomal trafficking of EGFR, and that loss of function leads to reduced MAP kinase pathway activation. Mouse radial glial progenitor cells knocked-out for WDR81 display reduced proliferation rates, leading to reduced brain size. These proliferation defects are rescued in vivo by the expression of megalencephaly-causing mutated Cyclin D2. Our results identify the endosomal machinery as an important regulator of RG cell proliferation rates and brain growth. They demonstrate that microcephaly and megalencephaly can be due to opposite effects on the proliferation rate of radial glial progenitors.

neuroscience↗