Biology subjects

Azmi, S. S.

Publications and source records attributed to Azmi, S. S..

4 recordsLinked to original sources

bioRxiv2026

Three-dimensional redistribution of pelagic fish aggregations associated with floating offshore wind farms

Floating offshore wind farms (F-OWFs) are rapidly expanding into offshore pelagic environments, yet their ecological consequences remain poorly resolved because quantitative, non-invasive monitoring is challenging at sea. Here, we integrated environmental DNA (eDNA) metabarcoding and scientific echosounding to assess fish community composition and three-dimensional aggregation structure around a commercial-scale F-OWF off the Goto Islands, Japan. We compared four stations adjacent to turbines with four offshore control stations under comparable environmental conditions across five sampling periods (April and August 2024; May, June, and August 2025) and three depth layers (5, 50, and 80-160 m). eDNA metabarcoding detected 126 fish species, and community structure based on the 30 most frequently detected taxa did not differ significantly between the F-OWF and control areas (Bray-Curtis PERMANOVA, p = 0.60). Species richness varied strongly with sampling period and water layer, with a significant water layer x period interaction, whereas overall richness did not differ between areas (Mann-Whitney U test, p = 0.18). In contrast, acoustic surveys revealed a marked difference in vertical structuring of fish aggregations: in the control area, NASC per mile increased with depth, while this depth-dependence disappeared near turbines. Moreover, the weighted mean normalized depth (WMND) indicated a shallower vertical center of aggregation in the F-OWF area (0.34) than in the control area (0.24), consistent with turbine-associated redistribution in the water column. Although voyage-level integrated NASC per mile did not differ significantly between areas (t-test, p = 0.83), mean values were higher near turbines. Together, these results indicate that F-OWFs can be associated with changes in the three-dimensional organization of fish aggregations without producing pronounced shifts in dominant taxonomic composition. Our study demonstrates the value of combining eDNA metabarcoding and acoustics for evaluating ecological effects of offshore renewable-energy infrastructures and provides a framework for standardized, long-term monitoring as F-OWF deployment accelerates globally.

ecology↗

bioRxiv2025

Trophic transfer of nanoplastics reduces larval survival of marine fish more than waterborne exposure

Microplastics (MPs) and nanoplastics (NPs) are widespread contaminants in marine environments and pose significant risks to aquatic organisms. However, physiological effects and survival consequences of different MP and NP exposure pathways during early developmental stages of marine fish remain poorly understood. We investigated effects of direct and indirect consumption of MPs and NPs by larvae of red sea bream (Pagrus major) using a controlled laboratory system. Larvae were exposed to fluorescently labeled polystyrene particles (3 {micro}m and 0.2 {micro}m) either directly from the water or indirectly via contaminated zooplankton prey. MPs and NPs were detected in digestive tracts of all exposed individuals, regardless of the exposure route. However, survival was significantly reduced in larvae that consumed NPs via rotifer predation, suggesting that ingestion of contaminated prey organisms may represent a greater hazard than direct uptake from water. In both groups, antioxidant enzymes, superoxide dismutase (SOD) and catalase (CAT) were elevated, suggesting induction of oxidative stress. Relative gene expression revealed greater upregulation of several stress and immune-related genes in larvae exposed to MPs via rotifer predation than via direct consumption. Our findings provide clear evidence that both MPs and NPs can alter physiological and molecular responses in marine fish larvae, especially via rotifer predation. This study suggests the importance of considering trophic interactions in ecotoxicological assessments of plastic pollution to address plastic bioavailability and toxicity during early life stages. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=114 SRC="FIGDIR/small/675286v1_ufig1.gif" ALT="Figure 1"> View larger version (24K): org.highwire.dtl.DTLVardef@1de4a22org.highwire.dtl.DTLVardef@d53060org.highwire.dtl.DTLVardef@5b13fborg.highwire.dtl.DTLVardef@17cd662_HPS_FORMAT_FIGEXP M_FIG C_FIG HighlightsO_LILarval survival was significantly reduced by nanoplastics via trophic transfer C_LIO_LIGrowth of larvae was not affected by micro-and nanoplastics C_LIO_LIMicro- and nanoplastics cause oxidative stress by both exposure routes C_LIO_LIUp-regulated gene expression revealed that larvae undergo various stresses C_LI

developmental biology↗

bioRxiv2025

Intraspecific differences in habitat depth in a deep-sea isopod, Bathynomus doederleini (Crustacea: Isopoda: Cirolanidae), off the west coast of Kyushu, Japan

The giant deep-sea isopod, Bathynomus doederleini, is a benthic scavenger distributed in the northwestern Pacific. Despite its ecological importance, little is known about its habitat use and intraspecific variation in body size in relation to depth. In this study, we examined the habitat depth, size structure, and distributional limits of B. doederleini off the western coast of Kyushu, Japan, using baited traps deployed at depths ranging from 151 to 821 m. A total of 1,152 individuals were collected, with the highest catch per unit effort (CPUE) observed between 300 and 500 m. CPUE declined sharply below 700 m, likely due to thermal constraints and interspecific competition. Body size distribution varied significantly with depth: minimum body size increased with depth, while maximum body size remained constant. Smaller individuals were more abundant in shallower, warmer waters, suggesting ontogenetic habitat segregation possibly driven by metabolic and competitive factors. No brooding individuals were captured, supporting previous findings that reproductive females avoid baited traps. These results suggest that B. doederleini forms a reproductively active population in the East China Sea, with ecological adaptations to thermal conditions and depth-related niche partitioning. This study highlights the importance of trap type and environmental gradients in understanding deep-sea species ecology.

ecology↗

bioRxiv2025

Primary and secondary microplastics do not affect hatching of Japanese flounder eggs

Microplastics (MPs) are pervasive pollutants that may threaten aquatic organisms, especially during early life stages. This study investigated effects of MPs on the hatching rate of Japanese flounder eggs. Fertilized eggs were exposed to polystyrene (PS) microbeads (primary microplastics) (3 and 10 {micro}m, at 20 and 200 particles/ml), and secondary MPs derived from coastal debris (rope, plastic bottles, fish net, string, and rubber pads) collected in Nagasaki, Japan. Hatching rates of flounder eggs were unaffected by either primary or secondary microplastics, suggesting limited impact of microplastics on this brief developmental stage.

developmental biology↗