Search bioRxiv⌕ Search

Biology subjects

Azevedo, P.

Publications and source records attributed to Azevedo, P..

3 recordsLinked to original sources

Effects of predictability and error on corticospinal excitability during an electronic prediction game

Background: Detecting environmental regularities is a sophisticated cognitive skill, but its neural basis remains unclear. We tested whether corticospinal excitability tracks stimulus predictability, prediction errors, and task progression while the participants played the Goalkeeper Game. Methods: Sixteen right-handed males (24.4 +/- 6.8 years) saved penalty kicks using index, middle, or ring fingers (left, center, right). Kick sequences were generated by a context tree model, in which contexts represent the minimum recent history required to predict the next event. Participants completed 1,200 trials (6 blocks x 200 trials each). Transcranial magnetic stimulation (TMS) delivered 400 ms before the go signal elicited motor evoked potentials (MEPs) in the first dorsal interosseous (FDI) and flexor digitorum superficialis (FDS) muscles during blocks 2, 4, and 6. Contexts were classified as unpredictable (1, 10) or predictable (2, 20, 00); prediction errors were defined for non-deterministic transitions after context 1. Log-MEPs were analyzed using mixed-effects models. Results: In FDI, a Predictability x Previous-Error x Block interaction emerged (F(2,8997)=6.89, p=.001), confined to the final block. Predictability increased MEP amplitudes after successful transitions (+6.3%; p=0.006) but decreased MEP amplitudes after failed transitions (-7.0%; p=0.007). For FDS, unpredictable trials elicited larger MEPs (+7.2%; p=0.002), and MEPs increased from block 2 to 6 (+16.8%; p=0.003). Conclusions: FDS MEP responses were broadly associated with uncertainty and task progression, whereas FDI MEP responses showed context-specific, error-dependent modulation after extended exposure, suggesting fine-grained predictive coding in goal-executing effectors.

neuroscience↗

Retroelement expansions underlie genome evolution in stingless bees

Stingless bees are essential pollinators and emerging models for studying behavioral and genomic evolution. In the genus Melipona, a major difference in heterochromatin organization defines two groups: Group I species (e.g., M. quadrifasciata) with <50% of pericentromeric heterochromatin and Group II species (e.g., M. scutellaris) containing >50% heterochromatin across their chromosomes. These differences are thought to correlate with genome size and transposable element (TE) content, offering a unique opportunity to explore how heterochromatin variation, TE dynamics, and chromosomal evolution interact in a phylogenetic context. We present pseudo-chromosome-level genome assemblies for M. quadrifasciata and M. scutellaris obtained by long-read sequencing and Hi-C scaffolding. Comparative analyses reveal conserved synteny but marked divergence in structural variants and TEs. M. scutellaris shows an expansion of retrotransposons, particularly Gypsy/DIRS1 elements, concentrated in TE hotspots linked to chromosomal rearrangements and structural variants. This coincides with distinct methylation entropy and an expansion of histone deacetylase orthologs, potentially affecting heterochromatin organization. The increased ratio of retrotransposons in M. scutellaris is counterbalanced by more DNA transposons in M. quadrifasciata, resulting in genomes of similar overall sizes but of distinct heterochromatin distribution. Advancing our understanding of genome evolution in eusocial insects, we provide high-resolution genomic resources for two Melipona species that differ in heterochromatin content. Our results highlight the complex role of TEs in shaping genomes and underscore their influence on chromosomal and epigenetic innovation, providing strong evidence that TE dynamics underly the striking heterochromatic differences observed in Melipona.

genomics↗

Neutralizing antibody-independent immunity to SARS-CoV-2 in hamsters and hACE-2 transgenic mice immunized with a RBD/Nucleocapsid fusion protein

The nucleocapsid (N) and the receptor binding domain (RBD) of the Spike (S) proteins elicit robust antibody and T cell responses either in vaccinated or COVID-19 convalescent individuals. We generated a chimeric protein that comprises the sequences of RBD from S and N antigens (SpiN). SpiN was highly immunogenic and elicited a strong IFN{gamma} response from T cells and high levels of antibodies to the inactivated virus, but no neutralizing antibodies. Importantly, hamsters and the human Angiotensin Convertase Enzyme-2-transgenic mice immunized with SpiN were highly resistant to challenge with the wild type SARS-CoV-2, as indicated by viral load, clinical outcome, lung inflammation and lethality. Thus, the N protein should be considered to induce T-cell-based immunity to improve SARS-CoV-2 vaccines, and eventually to circumvent the immune scape by variants.

immunology↗