Austad, S. | Search bioRxiv

bioRxiv2024

Age, Sex, and mitochondrial-haplotype influence gut microbiome composition and metabolites in a genetically diverse rat model.

We evaluated the impact of sex and mitochondrial-haplotype on the age-related changes in the fecal gut microbiome of the genetically heterogeneous rodent model, the OKC-HETB/W rat. Alpha-diversity, measuring richness and evenness of gut microbiome composition, did not change with age or mitochondrial-haplotype. However, beta-diversity, a measure of microbial differences among samples, was significantly modulated by age in male and female rats in both mitochondrial-haplotypes. The age-related changes in the microbiome differed markedly between male and female rats. Five microbial species changed significantly with age in male rats compared to nine microbial species in female rats. Only three of these microbes changed with age in both male and female rats. The mitochondrial-haplotype of the rats also affected how aging altered the microbiome. Interestingly, most of the microbial species that changed significantly with age were mitochondrial-haplotype and sex specific, i.e., changing in one sex and not the other. We also discovered that sex and mitochondrial-haplotype significantly affected the age-related variations in content of fecal short-chain fatty acids and plasma metabolites that influence or are regulated by the microbiome, e.g., tryptophan derived metabolites and bile acids. This study demonstrates that the hosts sex plays a significant role in how the gut microbiome evolves with age, even within a genetically diverse background. Importantly, this is the first study to show that the mitochondrial-haplotype of a host impacts the age-related changes in the microbiome and supports previous studies suggesting a bidirectional interaction between the gut microbiome and host mitochondria. HighlightsMost age-related changes in microbial species occurred in one sex but not the other Mitochondrial-haplotype altered the microbiome and was generally sex dependent Microbiome associated metabolites differed by age, sex, and mitochondria-haplotype

microbiology↗

bioRxiv2017

Hydra, a model system for deciphering the mechanisms of aging and resistance to aging

The freshwater cnidarian polyp named Hydra, which can be mass-cultured in the laboratory, is characterized by a highly dynamic homeostasis with a continuous self-renewal of its three adult stem cell populations, the epithelial stem cells from the epidermis, the epithelial stem cells from the gastrodermis, and the multipotent interstitial stem cells, which provide cells of the nervous system, gland cells and germ cells. Two unusual features characterize these stem cells that cannot replace each other, they all avoid G1 to pause in G2, and the two epithelial populations are concomitantly multifunctional and stem cells. H. vulgaris that does not show any signs of aging over the years, resists to weeks of starvation and adapts to the loss of neurogenesis, providing a unique model system to study the resistance to aging. By contrast some strains of a distinct species named H. oligactis undergo a rapid aging process when undergoing gametogenesis or when placed in stress conditions. The aging phenotype is characterized by the rapid loss of somatic interstitial stem cells, the progressive reduction in epithelial stem cell self-renewal, the loss of regeneration, the disorganization of the neuro-muscular system, the loss of the feeding behavior, and the death of all animals within about three months. We review here the possible mechanisms that help H. vulgaris to sustain stem cell self-renewal and thus bypass aging processes. For this, FoxO seems to act as a pleiotropic actor, regulating stem cell proliferation, stress response and apoptosis. In H. oligactis, the regulation of the autophagy flux differs between aging-sensitive and aging-resistant animals, pointing to a key role for proteostasis in the maintenance of a large pool of active and plastic epithelial stem cells.

evolutionary biology↗