Search bioRxiv⌕ Search

Biology subjects

Amadji, G. L.

Publications and source records attributed to Amadji, G. L..

2 recordsLinked to original sources

Genotype-by-environment interaction analysis for flowering, maturity time and yield in fonio across traditional and prospective production areas in Northern Benin

In this study, the critical gap in understanding how fonio responds to contrasting pedoclimatic conditions, both within and outside its traditional production areas was addressed. A multi-environment trial was carried out to identify high-yielding genotypes with either broad stability or specific adaptation, thereby enabling targeted varietal recommendations to support the expansion of fonio cultivation into new areas. Randomized complete block design was used in six environments with eleven genotypes to evaluate flowering and maturity times, and grain yield. The Additive Main effect and Multiplicative Interaction and the Genotype main effect and Genotype x Environment interaction biplots revealed a significant effect of the genotype-by-environment interactions on traits, with genotypes B12 and G31 identified as high-yielding, while genotypes M5 and M14 were revealed as early-flowering and maturing. Genotypes M14 and M15 were adapted to all environments and early maturing. Boukoumbe, known as the fonio production area in Benin, was the most desirable for earliness, while Ina was the most ideal for grain yield, proving that fonio could be cultivated in Sudanian and Sudano-Guinean areas. Factor analysis revealed precipitation, C:N ratio, soil pH and texture as the main environmental variables influencing the grain yield in fonio. Our findings contributed to selecting stable, adapted genotypes.

genetics↗

Diversity of soil bacterial communities in response to fonio genotypes and pedoclimatic conditions in Benin

In sub-Saharan regions, soil fertility is a major concern for plant productivity, influenced by physical, chemical, and biological components. Among biological properties, the recruitment of soil microbial communities by plant roots is influenced by both physico-chemical soil properties and plant characteristics, dependent on species or genotypes. Here, rhizosphere bacterial communities associated with five fonio genotypes cultivated under three locations were investigated. Rhizosphere soils were collected for high-throughput 16S rRNA gene sequencing to characterize soil bacterial diversity. Additional parameters were assessed to classify soil fertility at three locations and to evaluate relationships between the bacterial communitys composition and soil fertility variables. PCA revealed a clear effect of location, whereas genotype had no significant impact on soil chemical properties or enzyme activities. Overall, soils were low in fertility, with Boukoumbe soil standing out for its higher chemical values and enzyme activities. For example, Boukoumbe reached 1.48% organic carbon, compared to 0.61% in Gogounou and 0.36% in Ina. Similarly, total nitrogen and available phosphorus were also higher in Boukoumbe. Regarding bacterial community, there is no impact of location and genotype on their richness and diversity. However, Bray-Curtis index revealed a significant difference in bacterial community structure among locations, but not among fonio genotypes. This suggests, in rhizosphere, bacterial community structure is more modulated by soil properties than crop genotypes. Proteobacteria and Bacteroidota were most abundant phyla, varying significantly across locations. Moraxellaceae and Oxalobacteraceae bacteria were most abundant families within Proteobacteria, while Chitinophagaceae and Weekselleceae dominated in Bacteroidota. Our study highlighted the significant roles of soil pH, as well as sulfate and nitrate content, in shaping bacterial communities. These findings offer valuable insights into the bacterial communities associated with fonio and their key drivers. This will support future research in identifying plant-growth bacteria that improve soil fertility and health, and crop productivity. HIGHLIGHTSO_LIStudied sites presented low chemical fertility, with a decreasing fertility gradient observed from Boukoumbe to Ina and Gogounou. C_LIO_LIFonio rhizosphere presents a similar alpha-diversity in bacterial communities across locations and genotypes. C_LIO_LIProteobacteria and Bacteroidota were the most abundant phyla in fonio rhizosphere, varying significantly across locations. C_LIO_LISoil pH, nitrates and sulfates contents were the key drivers of the bacterial community composition in fonio rhizosphere, whatever the location. C_LI

microbiology↗