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Allen, K. E.

Publications and source records attributed to Allen, K. E..

3 recordsLinked to original sources

eIF2Bα subcellular localisation - a potential link between translation initiation and stress granule formation?

The eukaryotic initiation factor 2B (eIF2B) complex is a guanine nucleotide exchange factor (GEF) that regulates translation initiation and is central to the integrated stress response (ISR). eIF2B exists as a decamer composed of catalytic ({gamma}, {varepsilon}) and regulatory (, {beta}, {delta}) subunits, which localise to cytoplasmic foci termed eIF2B bodies. While eIF2B bodies exhibit dynamic changes during stress, the role of individual subunits in the formation of bodies and localisation of subunits to additional cytoplasmic foci remains unclear. Here, we investigate the contribution of eIF2B to eIF2B body integrity and investigate alterations in eIF2B localisation during cellular stress. Using immunocytochemistry in neural cell lines, we demonstrate that all endogenous eIF2B subunits form cytoplasmic foci. Whilst eIF2B co-localises with the eIF2B{gamma} catalytic subunit in large bodies (>1 m{superscript 2}) it also forms smaller foci independently. We find cell type differences in the formation of foci containing eIF2B and eIF2B{varepsilon} subunits, in the absence of changes in protein expression. Stress induction significantly increased eIF2B and eIF2B{varepsilon} foci without altering protein expression, suggesting cell-type specific and ISR-driven reorganisation. siRNA-mediated knockdown of eIF2B disrupted large eIF2B body formation, an effect reversed by ISRIB, which stabilizes eIF2B tetramers, highlighting eIF2Bs essential role in decamer assembly. Furthermore, we reveal that eIF2B, and to a lesser extent eIF2B{varepsilon}, localize to SGs under ER and oxidative stress, with colocalisation dependent on eIF2 phosphorylation. Cells harbouring an EIF2B1 p.Leu99Pro mutation, which impairs ISR sensing, exhibited reduced SG formation and abolished eIF2B-SG colocalization. These findings suggest that eIF2B not only stabilizes eIF2B bodies but also mediates ISR signalling and SG dynamics via a mechanism reliant on phosphorylated eIF2. Collectively, our study uncovers a dual role for eIF2B in maintaining eIF2B complex integrity and regulating stress-responsive mRNA triage, providing new insights into translational control and disease mechanisms linked to eIF2B dysfunction.

cell biology↗

eIF2B localisation and its regulation during the integrated stress response is cell type specific

Eukaryotic initiation factor 2B (eIF2B) is a master regulator of translation control. eIF2B recycles inactive eIF2-GDP to active eIF2-GTP. Under transient/acute cellular stress, a family of kinases phosphorylate the alpha subunit of eIF2 (eIF2-P[S51]) activating the integrated stress response (ISR). This response pathway inhibits eIF2B activity resulting in overall translation attenuation and reprogramming of gene expression to overcome the stress. The duration of an ISR programme can dictate cell fate wherein chronic activation has pathological outcomes. Vanishing white matter disease (VWMD) is a chronic ISR-related disorder linked to mutations in eIF2B. eIF2B is vital to all cell types, yet VWMD eIF2B mutations primarily affect astrocytes and oligodendrocytes suggesting cell type-specific functions of eIF2B. Regulation of the cytoplasmic localisation of eIF2B (eIF2B bodies) has been implicated in the ISR. Here, we highlight the cell type specific localisation of eIF2B within neuronal and glial cell types. Our analyses revealed that each cell type possesses its own steady-state repertoire of eIF2B bodies with varied subunit composition and activity. We also demonstrate that neural and glial cell types respond similarly to acute induction of the ISR whilst a chronic ISR programme exerts cell type-specific differences. Regulatory composition of eIF2B bodies is suggested to be differentially modulated in a manner that correlates to the action of acute and chronic ISR. We also highlight a cell type specific response of the ISR inhibitor ISRIB on eIF2B localisation and activity.

cell biology↗

Optimisation of immunocytochemistry methodology for the detection of endogenous eIF2B localised foci

The multisubunit eukaryotic initiation factor 2B (eIF2B), a guanine nucleotide exchange factor (GEF) for eIF2, is an essential regulator of translation initiation. Activation of the cellular integrated stress response (ISR) by factors such as endoplasmic reticulum stress leads to phosphorylation of eIF2 and inhibition of eIF2B GEF activity. Cytoplasmic bodies containing eIF2B subunits, termed eIF2B bodies, have been shown to alter in subunit composition and fluorescence recovery after photobleaching activity in response to the ISR. Analysis of the subunit composition of endogenous eIF2B bodies is dependent on accurate detection of each protein in a cellular context via immunocytochemistry (ICC). We describe bioinformatic techniques to optimize the ICC detection of eIF2B foci in U373 cells. The screening of commercially available primary antibodies against predicted epitopes enhanced measurements of the number, size and fluorescence intensity of eIF2B bodies. A consistent and reproducible ICC analysis of endogenous eIF2B bodies will aid characterisation of eIF2B bodies during the ISR or under disease conditions. SummaryeIF2B is a housekeeping protein and localised eIF2B foci, named eIF2B bodies, can be detected through immunocytochemistry. Here, we discuss the use of immunoinformatics to optimise eIF2B localisation detection.

cell biology↗