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Alimov, A.

Publications and source records attributed to Alimov, A..

2 recordsLinked to original sources

The circadian clock regulates KCNH2 (hERG) promoter activity through daily temperature rhythms.

Background: KCNH2 encodes Kv11.1 channel proteins that conduct the rapidly activating delayed-rectifier K+ current (IKr), which is critical for cardiac repolarization. KCNH2 encodes two functional isoforms, Kv11.1a and Kv11.1b, via alternative transcription start sites. Kv11.1a is the principal determinant of cardiac IKr and ventricular repolarization. The circadian clock, a transcriptional-translational feedback loop that cycles with a period of ~24 hours and drives the circadian expression of many genes, including Kcnh2 in the mouse heart. Because daily body temperature rhythms provide a systemic signal that synchronizes cardiac circadian clocks, we tested whether physiological temperature cycles drive the circadian promoter activity of the cloned human KCNH2 (hKCNH2) promoter. Hypothesis: hKCNH2 is a direct transcriptional target of the circadian clock, with temperature driving its promoter activity through BMAL1:CLOCK acting at a conserved tandem E-box. Methods: We cloned the conserved proximal promoter of KCNH2 (-1631 bp upstream of Kv11.1a exon 1) to generate hKCNH2 promoter luciferase reporter constructs. Constructs were transfected into C2C12 myotubes and synchronized by serum shock (static 37{degrees}C) or temperature cycling (36.5-38.5{degrees}C). Bioluminescence was recorded and assessed for period, phase, and amplitude. BMAL1:CLOCK dependence was tested via dominant-negative CLOCK{Delta}19 co-expression. Results: Temperature cycling did not exhibit the rapid damping characteristic of serum-shock-synchronized oscillations, consistent with continuous entrainment by an external zeitgeber rather than a free-running oscillator. Deletion analysis identified a conserved tandem E-box required for oscillation under both serum shock and temperature cycling, and for BMAL1:CLOCK-dependent transactivation (1.75 {+/-} 0.21 vs. 0.86 {+/-} 0.06 RLU, p = 0.0038). CLOCK{Delta}19 reduced hKCNH2 promoter amplitude under temperature cycling without altering period. Conclusion: The circadian clock regulates KCNH2 promoter activity through daily temperature rhythms.

cell biology↗

Phylogenetic relationships of ATM polymorphic loci haplotypes in Eurasian and African populations

The ATM gene encodes a key kinase involved in DNA repair and cell cycle control, and mutations in it lead to the development of ataxia-telangiectasia and increase susceptibility to cancer. In this context, the study of the distribution patterns of ATM haplotypes in metapopulations living in Eurasia and Africa using population genetic and genogeographic methods appears to be a socially important scientific endeavor. Polymorphic markers of the ATM gene were studied in 3876 individuals from 46 metapopulations, ATM gene haplotypes and genotypes based on ATM haplotypes were determined, and population frequencies of haplotypes and genotypes were calculated. An analysis of phylogenetic relationships of haplotypes, the Tajima test to assess population changes, and mapping of population frequencies of ATM gene haplotypes and genotypes were performed. The study showed the presence of a linkage block of 28 polymorphic markers of the ATM gene in the Eurasian and African populations. Two dominant ATM haplotypes in Eurasia, which are the result of-independent evolution of two branches from the ancestral ATM haplotype, are formed by mutually exclusive alleles and correspond to the "yin-yang" concept. The greatest diversity of ATM haplotypes is observed on the African continent. It is suggested that the process of haplotype formation occurred on the African continent, with subsequent migration events to the territory of Eurasia.

evolutionary biology↗