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Biology subjects

Alexandrovich, A.

Publications and source records attributed to Alexandrovich, A..

2 recordsLinked to original sources

Obscurin Rho GEF domains are phosphorylated by MST-family kinases but do not exhibit nucleotide exchange factor activity towards Rho GTPases in vitro

Obscurin is a giant muscle protein (>800 kDa) featuring multiple signalling domains, including an SH3-DH-PH domain triplet from the Trio-subfamily of guanosine nucleotide exchange factors (GEFs). While previous research suggests that these domains can activate the small GTPases RhoA and RhoQ in cells, in vitro characterization of these interactions using biophysical techniques has been hampered by the intrinsic instability of obscurin GEF domains. To study substrate specificity, mechanism and regulation of obscurin GEF function by individual domains, we successfully optimized recombinant production of obscurin GEF domains and found that MST-family kinases phosphorylate the obscurin DH domain at Thr5798. Despite extensive testing of multiple GEF domain fragments, we did not detect any nucleotide exchange activity in vitro against 9 representative small GTPases. Bioinformatic analyses show that obscurin differs from other Trio-subfamily GEFs in several important aspects. While further research is necessary to evaluate obscurin GEF activity in vivo, our results indicate that obscurin has atypical GEF domains that, if catalytically active at all, are subject to complex regulation.

biochemistry↗

Molecular Noise-Filtering in the β-adrenergic Signaling Network by Phospholamban Pentamers

Phospholamban (PLN) is an important regulator of calcium handling in cardiomyocytes due to its ability to inhibit the sarco(endo)plasmic reticulum calcium-ATPase (SERCA) {beta}-adrenergic stimulation reverses SERCA inhibition via PLN phosphorylation and facilitates fast calcium reuptake PLN also forms pentamers whose physiological significance has remained elusive Using biochemical experiments and mathematical modeling, we show that pentamers regulate both the dynamics and steady-state levels of monomer phosphorylation Substrate competition by pentamers and a feed-forward loop involving inhibitor-can delay monomer phosphorylation by protein kinase A (PKA) Steady-state phosphorylation of PLN is predicted to be bistable due to cooperative dephosphorylation of pentamers Both effects act as complementary noise-filters which can reduce the effect of random fluctuations in PKA activity Pentamers thereby ensure consistent monomer phosphorylation and SERCA activity in spite of noisy upstream signals Preliminary analyses suggest that the PLN mutation R del could impair noise-filtering, offering a new perspective on how this mutation causes cardiac arrhythmias.

systems biology↗