Biology subjects

Aiello, C. D.

Publications and source records attributed to Aiello, C. D..

6 recordsLinked to original sources

bioRxiv2026

Differential Transcription of Escherichia Coli K-12 Genes Under Hypomagnetic and Geomagnetic Conditions

The transcriptomic response of Escherichia coli to hypomagnetic versus geomagnetic exposure was examined using RNA sequencing across seven pairwise comparisons of differently conditioned cultures. Eighty-one genes were reproducibly differentially expressed, meeting significance and fold-change criteria in at least four of seven comparisons. The direction of differential expression tracked the 90-minute magnetic field exposure condition rather than the magnetic field conditions to which the seed cultures were exposed, indicating that the response is driven by acute field exposure rather than culture history. The affected genes point to a distinct metabolic state layered on top of lag phase, marked by atypical iron stress, downregulation of the flagellar regulon, and a phosphotransferase-mediated carbon-metabolism program favoring rapid energy acquisition over growth.

microbiology↗

bioRxiv2026

An Open-Source Magnetofluorescence Imaging Platform forPlate-Scale Screening of Magnetic Field Effects in LiveBacteria

Magnetic field effects (MFEs) in biological systems are typically small and experimentally challenging to measure reproducibly across large sample populations. Existing approaches to measure such effects often rely on low-throughput microscopy or custom-built magnetic stimulation systems that provide limited control over magnetic field geometry, synchronization, or experimental automation. Here, we present an open-source magnetofluorescence imaging platform designed for bacterial plate-scale screening of MFEs in live colonies. The instrument integrates a programmable three-axis vector electromagnet, synchronized fluorescence excitation and imaging, and integrated acquisition software with per-frame metadata logging on a hardware-synchronized data acquisition card. An extensive calibration procedure enables accurate generation of arbitrary magnetic field vectors, while synchronized triggering ensures deterministic alignment between field application, illumination, and image acquisition. The system images an entire 100 mm Petri dish in a single acquisition. Typical experiments monitor hundreds of bacterial colonies simultaneously over multi-hour acquisition sequences. Control software, calibration routines, mechanical design files, and acquisition workflows are provided openly to facilitate replication. Instrument performance is demonstrated through detection of magnetic field-dependent fluorescence changes in E. coli expressing the engineered magnetosensitive fluorescent protein MagLOV2. This instrument provides a flexible and scalable platform for high-throughput magnetobiology, synthetic biology, and quantum biology experiments.

bioengineering↗

bioRxiv2026

Measuring magnetic field effects in fluorescent flavoproteins via spin-dependent fluorescence intensity requires photoexcitation to be faster than spin-independent ground state recovery

Weak magnetic fields affect many biological processes across the tree of life, though the precise molecular sensors and pathways involved in such magnetoresponses remain mostly uncharacterized. Fluorescence is a useful tool for investigating magnetic field effects in flavoproteins, as their chromophores fluorescence intensity can be shown to depend on the spin states of electronic radical pairs. Here, we describe a four-state ordinary differential equation model to understand what parameter sets result in fluorescence contrast between spin states in photocycles with singlet and triplet radical pairs. We conclude that only certain sets of parameters result in the fluorescence intensity being a good proxy measurement for singlet yield. In particular, we observe that the illumination intensity required to obtain fluorescence contrast depends on the rate of the slow spin-independent radical termination reactions that recover ground-state oxidized fluorophores. Moreover, to observe a magnetic field effect in fluorescence intensity when an external magnetic field modulates the singlet yield, the illumination intensity must be strong enough such that photoexcitation is not the rate-limiting step. This understanding suggests that flavoproteins that do not exhibit magnetic field effects in their fluorescence emission under certain experimental setups may still be sensitive to weak magnetic fields in terms of function, as magnetosensitivity in fluorescence depends strongly on illumination conditions.

biophysics↗

bioRxiv2026

Escherichia coli K12 exhibits a ~50% longer lag phase, but no difference in log phase growth rate, under hypomagnetic conditions (19 nT)

Previous investigations have explored the effects of hypermagnetic fields, that is, fields in excess of the Earths background geomagnetic field strength of approximately 50 {micro}T, on Escherichia coli (E. coli). Conversely, this study investigates the effects of hypomagnetic field conditions, that is, fields below the geomagnetic background intensity, on the growth of E. coli K12 by using a hypomagnetic chamber to shield cultures, with a measured residual magnetic field inside the chamber of 19 nT. When grown in rich media from a semi-anaerobic, stationary-phase starting culture under geomagnetic and hypomagnetic conditions, the lag phases of E. coli were approximately 86 minutes and 132 minutes, respectively. Despite this increase in lag phase, exceeding two E. coli doubling times, the log-phase growth rate of E. coli was identical under both geomagnetic and hypomagnetic conditions. In addition to demonstrating a biologically relevant sensitivity to magnetic field parameters in the hypomagnetic direction, this represents a much greater absolute magnetosensitivity, with a deviation of only 50 {micro}T between the hypomagnetic and geomagnetic conditions, than has previously been demonstrated for E. coli.

biophysics↗

bioRxiv2026

The magnetic field-dependent fluorescence of MagLOV2 in live bacterial cells is consistent with the radical pair mechanism

MagLOV2 is an engineered flavoprotein designed to have large changes in fluorescence intensity in response to weak magnetic fields. Here, we characterize the magnitude of these fluorescence changes, known as the "magnetic field effect," as a function of the strength of an externally applied magnetic field in E. coli colonies expressing MagLOV2. We observe that the magnetic field effect is positive at low magnetic fields, reaches a maximum positive value near 1 mT, and then decreases, reversing sign at approximately 2 mT. Furthermore, the effect starts to plateau above approximately 70 mT, with a decreased sensitivity of fluorescence changes to magnetic fields above this range. The non-monotonic behavior, as well as the diminished responsiveness to higher magnetic fields, are consistent with the changes in fluorescence being driven by electron spin-dependent chemical processes governed by the radical pair mechanism.

biophysics↗

bioRxiv2024

Weak magnetic field effects in biology are measurable--accelerated Xenopus embryogenesis in the absence of the geomagnetic field

Despite decades of reports of weak magnetic field effects in biology across the tree of life and on a broad range of cell types, the evidence to date remains met with skepticism. To remedy this, we present open-data, large-scale, and varied morphological evidence that Xenopus laevis embryo development is accelerated in a well-engineered, environmentally-calibrated hypomagnetic field of less than 1 nT. These data imply that basal tadpole physiology can sense and react to the absence of Earths minute magnetic field of approximately 50 {micro}T. The effect is significant, as demonstrated by a variety of statistical measures. As no definitive biophysical mechanism has been identified to account for its occurrence, this study raises the question of which mechanism provides the most plausible explanation. How that question is answered may have implications in a variety of fields, including human health, behavioral ecology, and space exploration.

biophysics↗