Biology subjects

Afrane, Y. A.

Publications and source records attributed to Afrane, Y. A..

9 recordsLinked to original sources

bioRxiv2026

Genetic surveillance of target site mutations and copy number variants associated with the escalating insecticide resistance in Anopheles gambiae (s.l.) in Ghana

The spread of insecticide resistance in malaria vectors poses a major challenge to control programs. As insecticide-based interventions intensify, selection for resistance alleles increases, making it essential to understand the genetic mechanisms underlying resistance in local Anopheles populations. This study characterized target-site resistance mutations and copy number variants (CNVs) in Anopheles gambiae s.l. from nine sites with different malaria vector interventions and ecological contexts. WHO bioassays revealed moderate-to-high pyrethroid resistance (4-65%) at all sites, while Obuasi (IRS) showed markedly elevated organophosphate resistance (1.7%) compared to other locations. The L995F kdr mutation was strongly associated with pyrethroid resistance (P < 0.05) and occurred at high frequencies in IRS and standard LLIN sites (0.82-1.0). Additional kdr variants (L995S, N1570Y, I1527T, V402L) appeared at variable frequencies (0-0.59). The Ace-1 G280S mutation was significantly associated with pirimiphos-methyl resistance (OR=2.20, P<0.001). Ace-1 gene duplications occurred in 22.8% of mosquitoes, predominantly in individuals carrying the G280S resistance allele (P<0.001). Carboxylesterase CNVs were also identified, with Coeaxf_Dup1 (30.4%) significantly associated with pirimiphos-methyl resistance (OR = 1.68, P = 0.02). These findings demonstrate the widespread, multifaceted resistance mechanisms in An. gambiae s.l. across Ghana and highlight the need for locally tailored vector control strategies.

molecular biology↗

bioRxiv2025

Biting time of day in malaria mosquitoes is modulated by nutritional status

BackgroundTransmission of vector-borne pathogens follows daily rhythms, occurring at the time of day that vectors forage for blood. Control measures such as insecticide-treated bed nets (ITNs) have been particularly successful for reducing malaria transmission, because they exploit the nocturnal biting behaviour of the Anopheles spp. that vector malaria. However, shifts in biting behaviour to earlier or later hours when people are unprotected can undermine the efficacy of ITNs. Despite the implications for malaria transmission, the mechanisms underlying these shifts remain poorly understood. Because food availability mediates activity and foraging rhythms, and ITNs block access to human blood as a food source, we hypothesized that nutritional deprivation could cause mosquitoes to shift their biting behaviour to earlier or later in the diel cycle. MethodsWe provided female Anopheles gambiae s.l. mosquitoes with a blood meal on day 3 post-emergence, and access to one of three feeding treatments that varied in nutritional resources: (i) 0.5% sucrose, (ii) 10% sucrose, or (iii) 10% sucrose plus an additional blood meal on day 6. We released mosquitoes into a semi-field system on day 10 with human-mimic traps to investigate how food availability impacted the time of day that mosquitoes host seek. ResultsNutritional resources determine both the likelihood and time of day that host seeking occurs. Specifically, low-resourced mosquitoes were 2-3 fold more likely to host seek overall, and 5-10 fold more likely to host seek at an earlier time of day than well-resourced mosquitoes (fed 10% sucrose with and without an additional blood meal), which predominantly sought a host in the second half of the night time. ConclusionsWe reveal that mosquito nutritional condition drives plasticity in biting time of day, suggesting it is an underappreciated contributor to residual malaria transmission. Furthermore, our results suggest that targeting mosquito nutrition (e.g. sugar-baited traps) could influence mosquito behaviour in ways that affect the success of ITNs. More broadly, understanding the drivers of biting time of day variation is crucial for the future success of vector control tools and controlling malaria transmission.

ecology↗

bioRxiv2025

Malaria vector diversity, transmission, and insecticide resistance, in island communities along the Volta Lake in southern Ghana.

Island communities along the Volta Lake in southern Ghana present unique challenges for malaria control, characterized by high transmission rates, limited vector control measures, and isolated ecosystems. This study assessed the malaria vector diversity, seasonal abundance, transmission, and insecticide resistance status of malaria vectors in these communities to inform effective control strategies. Mosquitoes were collected from three island communities (Tuanikope, Allorkpem, and Pediatorkope) using human landing catches, light traps, and prokopack aspirators during the dry and rainy seasons. Morphological and molecular techniques were used to identify mosquito species, determine blood meal sources, and detect insecticide resistance mutations. Sporozoite infections and entomological inoculation rates (EIRs) were also quantified. A total of 25,079 mosquitoes from four genera were collected; Culicine = 88.19%, Anopheline = 8.89%. Mansonia = 2.24%. The Anophelines predominantly comprised Anopheles gambiae s.l. 1,911/2,230 (85.70%), followed by An. pharoensis 236/2,230 (10.58%) and An. rufipes 83/2,230 (3.72%). Indoor biting and resting densities were high across sites and seasons, with sporozoite-positive mosquitoes more frequently found indoors. Blood meal analysis revealed a strong anthropophilic feeding pattern (HBI = 80%). Annual EIRs ranged from 37.40 (ib/m/y) to 100.08 (ib/m/y). Low frequencies of insecticide resistance mutations (Vgsc-1014F, Vgsc-1014S, ACE-1, and Vgsc-1575Y) were observed. The study indicates high indoor biting and resting densities of Anopheles mosquitoes. High sporozoite rate along with low resistance mutation frequencies observed, emphasize the urgent need for continuous resistance monitoring and the implementation of targeted vector control strategies in these hard-to-reach island communities.

microbiology↗

bioRxiv2023

First detection of Anopheles stephensi in Ghana using molecular surveillance

The invasive Anopheles stephensi mosquito has been rapidly expanding in range in Africa over the last decade, spreading from the Indian sub-continent to several East African countries (Djibouti, Ethiopia, Sudan, Somalia and Kenya) and now in West Africa, Nigeria. The rapid expansion of this invasive vector poses a major threat to current malaria control and elimination efforts. In line with the WHOs strategy to stop the spread of this invasive species by enhancing surveillance and control measures in Africa, we incorporated morphological and molecular surveillance of An. stephensi into routine entomological surveillance of malaria vectors in the city of Accra, Ghana. Here, we report on the first detection of An. stephensi in Ghana. An. stephensi mosquitoes were confirmed using PCR and sequencing of the ITS2 regions. These findings highlight the urgent need for increased surveillance and response strategies to mitigate the spread of An. stephensi in Ghana.

ecology↗

bioRxiv2022

Genetic and microbial diversity of the invasive mosquito vector species Culex tritaeniorhynchus across its extensive inter-continental geographic range

Culex (Cx.) tritaeniorhynchus is a mosquito species with an extensive and expanding inter-continental geographic distribution, currently reported in over 50 countries, across Asia, Africa, the Middle East, Europe and now Australia. It is an important vector of medical and veterinary concern, capable of transmitting multiple arboviruses which cause significant morbidity and mortality in human and animal populations. In regions endemic for Japanese encephalitis virus (JEV) in Asia, Cx. tritaeniorhynchus is considered the major vector and this species has also been shown to contribute to the transmission of several other significant zoonotic arboviruses, including Rift Valley fever virus and West Nile virus. Significant variation in vectorial capacity can occur between different vector populations. Obtaining knowledge of a species from across its geographic range is crucial to understanding its significance for pathogen transmission across diverse environments and localities. Vectorial capacity can be influenced by factors including the mosquito genetic background, composition of the microbiota associated with the mosquito and the co-infection of human or animal pathogens. In addition to enhancing information on vector surveillance and potential risks for pathogen transmission, determining the genetic and microbial diversity of distinct populations of a vector species is also critical for the development and application of effective control strategies. In this study, multiple geographically dispersed populations of Cx. tritaeniorhynchus from countries within Europe, Africa, Eurasia and Asia were sampled. Molecular analysis demonstrated a high level of genetic and microbial diversity within and between populations, including genetic divergence in the mosquito CO1 gene, as well as diverse microbiomes identified by 16S rRNA gene amplicon sequencing. Evidence for the detection of the endosymbiotic bacteria Wolbachia in some populations was confirmed using Wolbachia-specific PCR detection and sequencing of Wolbachia MLST genes; in addition to PCR-based detection of insect-specific viruses. Laboratory vector competence showed Cx. tritaeniorhynchus from a Greek population are likely to be competent vectors of JEV. This study expands understanding of the diversity of Cx. tritaeniorhynchus across its inter-continental range, highlights the need for a greater focus on this invasive vector species and helps to inform potential future directions for development of vector control strategies.

genetics↗

bioRxiv2021

Larval ecology and bionomics of Anopheles funestus in highland and lowland sites in western Kenya

BackgroundAn. funestus is a major Afrotropical vector of human malaria. This study sought to investigate the larval ecology, sporozoite infection rates and blood meal sources of An. funestus in western Kenya. MethodsLarval surveys were carried out in Bungoma (Highland) and Kombewa (lowland) of western Kenya. Aquatic habitats were identified, characterized, georeferenced and carefully examined for mosquito larvae and predators. Indoor resting mosquitoes were sampled using pyrethrum spray catches. Adults and larvae were morphologically and molecularly identified to species. Sporozoite infections and blood meal sources were detected using real-time PCR and ELISA respectively. ResultsOf the 151 aquatic habitats assessed, 62/80 (78%) in Bungoma and 58/71(82%) in Kombewa were positive for mosquito larvae. Of the 3,193 larvae sampled, An. funestus larvae constitute 38% (1224/3193). Bungoma recorded a higher number of An. funestus larvae (85%, 95%, CI, 8.722-17.15) than Kombewa (15%, 95%, CI, 1.33-3.91). Molecular identification of larvae showed that 89% (n=80) were An. funestus. Approximately 59%, 35% and 5% of An. funestus larvae co-existed with An. gambiae s.l, Culex spp and An. coustani in the same habitats respectively. Of 1,221 An. funestus s.l adults sampled, molecular identifications revealed that An. funestus constituted 87% (n=201) and 88% (n=179) in Bungoma and Kombewa, respectively. The Plasmodium falciparum sporozoite rate of An. funestus in Bungoma and Kombewa was 2% (3/174) and 1% (2/157), respectively, and the human blood index of An. funestus was 84% (48/57) and 89% (39/44) and for Bungoma and Kombewa, respectively. ConclusionMan-made ponds had the highest abundance of An. funestus larvae. Multiple regression and principal component analyses identified the distance to the nearest house as the key environmental factor associated with the abundance of An. funestus larvae in aquatic habitats. This study serves as a guide for the control of An. funestus and other mosquito species to complement existing vector control strategies.

ecology↗

bioRxiv2020

Biting and resting preferences of malaria vectors in The Gambia

BackgroundThe scale-up of indoor residual spraying and long-lasting insecticidal nets, together with other interventions have considerably reduced the malaria burden in The Gambia. This study examined the biting and resting preferences of the local insecticide-resistant vector populations few years following scale-up of anti-vector interventions. MethodIndoor and outdoor-resting Anopheles gambiae mosquitoes were collected between July and October 2019 from ten villages in five regions in The Gambia using pyrethrum spray collection (indoor) and prokopack aspirator from pit traps (outdoor). Polymerase chain reaction assays were performed to identify molecular species, insecticide resistance mutations, Plasmodium infection rate and host blood meal. ResultsA total of 844 mosquitoes were collected both indoors (421, 49.9%) and outdoors (423, 50.1%). Four main vector species were identified, including An. arabiensis (indoor: 15%, outdoor: 26%); An. coluzzii (indoor: 19%, outdoor: 6%), An. gambiae s.s. (indoor: 11%, outdoor: 16%), An. melas (indoor: 2%, outdoor: 0.1%) and hybrids of An. coluzzii-An. gambiae (indoors: 3%, outdoors: 2%). A significant preference for outdoor resting was observed in An. arabiensis (Pearson X2=22.7, df=4, P<0.001) and for indoor resting in An. coluzzii (Pearson X2=55.0, df=4, P<0.001). Prevalence of the voltage-gated sodium channel (Vgsc)-1014S was higher in the indoor-resting (allele freq. = 0.96, 95%CI: 0.78-1) than outdoor-resting (allele freq. = 0.82, 95%CI: 0.76-0.87) An. arabiensis population. For An. coluzzii, the prevalence of most mutation markers were higher in the outdoor (allele freq. = 0.92, 95%CI: 0.81-0.98) than indoor-resting (allele freq. = 0.78, 95%CI: 0.56-0.86) mosquitoes. Sporozoite positivity rate was 1.3% (95% CI: 0.5-2%). Indoor-resting An. coluzzii had mainly fed on human blood while indoor-resting An. arabiensis, animal blood. ConclusionThe indoor-resting behavior of An. arabiensis that preferred animal blood and had low sporozoite rates, may be determined by the Vgsc-1014S mutation. Control interventions may include complementary vector control approaches such as zooprophylaxis.

molecular biology↗

bioRxiv2020

Insecticide resistance status of indoor and outdoor resting malaria vectors in a highland and lowland site in Western Kenya

BackgroundLong Lasting Insecticidal Nets (LLINs) and indoor residual spraying (IRS) represent powerful tools for controlling malaria vectors in sub-Saharan Africa. The success of these interventions relies on their capability to inhibit indoor feeding and resting of malaria mosquitoes. This study sought to understand the interaction of insecticide resistance with indoor and outdoor resting behavioral responses of malaria vectors from Western Kenya. MethodsThe status of insecticide resistance among indoor and outdoor resting anopheline mosquitoes was compared in Anopheles mosquitoes collected from Kisumu and Bungoma counties in Western Kenya. The level and intensity of resistance were measured using WHO-tube and CDC-bottle bioassays, respectively. The synergist piperonyl butoxide (PBO) was used to determine if metabolic activity (monooxygenase enzymes) explained the resistance observed. The mutations at the voltage-gated sodium channel (Vgsc) gene and Ace 1 gene were characterized using PCR methods. Microplate assays were used to measure levels of detoxification enzymes if present. ResultsA total of 1094 samples were discriminated within Anopheles gambiae s.l. and 289 within An. funestus s.l. In Kisian (Kisumu county), the dominant species was Anopheles arabiensis 75.2% (391/520) while in Kimaeti (Bungoma county) collections the dominant sibling species was Anopheles gambiae s.s 96.5% (554/574). The An. funestus s.l samples analysed were all An. funestus s.s from both sites. Pyrethroid resistance of An.gambiae s.l F1 progeny was observed in all sites. Lower mortality was observed against deltamethrin for the progeny of indoor resting mosquitoes compared to outdoor resting mosquitoes (Mortality rate: 37% vs 51%, P=0.044). The intensity assays showed moderate-intensity resistance to deltamethrin in the progeny of mosquitoes collected from indoors and outdoors in both study sites. In Kisian, the frequency of vgsc-L1014S and vgsc-L1014F mutation was 0.14 and 0.19 respectively in indoor resting malaria mosquitoes while those of the outdoor resting mosquitoes were 0.12 and 0.12 respectively. The ace 1 mutation was present in higher frequency in the F1 of mosquitoes resting indoors (0.23) compared to those of mosquitoes resting outdoors (0.12). In Kimaeti, the frequencies of vgsc-L1014S and vgsc-L1014F were 0.75 and 0.05 respectively for the F1 of mosquitoes collected indoors whereas those of outdoor resting ones were 0.67 and 0.03 respectively. The ace 1 G119S mutation was present in progeny of mosquitoes from Kimaeti resting indoors (0.05) whereas it was absent in those resting outdoors. Monooxygenase activity was elevated by 1.83 folds in Kisian and by 1.33 folds in Kimaeti for mosquitoes resting indoors than those resting outdoors respectively. ConclusionThe study recorded high phenotypic, metabolic and genotypic insecticide resistance in indoor resting populations of malaria vectors compared to their outdoor resting counterparts. The indication of moderate resistance intensity for the indoor resting mosquitoes is alarming as it could have an operational impact on the efficacy of the existing pyrethroid based vector control tools. The use of synergist (PBO) in LLINs may be a better alternative for widespread use in these regions recording high insecticide resistance.

zoology↗

bioRxiv2018

Novel Wolbachia strains in Anopheles malaria vectors from Sub-Saharan Africa

Anopheles (An.) mosquitoes contain bacteria that can influence Plasmodium parasites. Wolbachia, a common insect endosymbiont, has historically been considered absent from Anopheles but has recently been found in An. gambiae populations. Here, we assessed a range of Anopheles species from five malaria-endemic countries for Wolbachia and Plasmodium infection. Strikingly, we found Wolbachia infections in An. coluzzii, An. gambiae s.s, An. arabiensis, An. moucheti and An. species A increasing the number of Anopheles species known to be naturally infected by this endosymbiont. Molecular analysis suggests the presence of phylogenetically diverse novel strains, while qPCR and 16S rRNA sequencing indicates that Wolbachia is the dominant member of the microbiota in An. moucheti and An. species A. We found no evidence of Wolbachia/Asaia co-infections, and presence of these endosymbionts did not have significant effects on malaria prevalence. We discuss the importance of novel Wolbachia strains in Anopheles and potential implications for disease control.

microbiology↗