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Acharjee, M.

Publications and source records attributed to Acharjee, M..

2 recordsLinked to original sources

Discovery of specific activity of 2-HPA acting on the membrane progestin receptor α (paqr7) by purification of natural products from the marine algae Padina

Membrane progestin receptors (mPRs) are members of the progestin and adipoQ (PAQR) receptor family that are stimulated by endogenous steroids to initiate rapid intracellular signalling through a nongenomic pathway. Previously, water-soluble compounds with mPR-binding activity from the marine algae Padina arborescens were fractionated by HPLC steps. In this study, the structure of one of the major compounds in the fraction was identified as 2-hydroxypentanoic acid (2-HPA) using Nuclear Magnetic Resonance spectroscopy. 2-HPA showed a substantial competitive binding affinity for hmPR in the GQD-hmPR binding assay. In contrast, synthetic structural analogues of 2-HPA showed no competitive binding activity. The physiological activity of 2-HPA and its analogues was then investigated using in vitro goldfish and in vivo zebrafish oocyte maturation and ovulation assays. As with the hmPR binding assay, only 2-HPA showed inhibitory activity on oocyte maturation and ovulation of fish oocytes. Furthermore, the inhibitory activity of 2-HPA was compared between S- and R-type 2-HPA. The results showed that both types had the same level of activity. These results indicate that 2-HPA, found as a secreted compound from Padina arborescens, is a novel mPR antagonist and its chemical structure is highly restricted to show its activity.

biochemistry↗

Structural characterization of a novel luciferase-like-monooxygenase from Pseudomonas meliae an in silico approach

BackgroundLuciferase is a well-known oxidative enzyme that produces bioluminescence. The Pseudomonas meliae is a plant pathogen that causes wood rot on nectarine and peach and possesses a luciferase-like monooxygenase. After activation, it produces bioluminescence, and the pathogens bioluminescence is a visual indicator of diseased plants. MethodsThe present study aims to model and characterize the luciferase-like monooxygenase protein in P. meliae for its similarity to well-established luciferase. In this study, the luciferase-like monooxygenase from P. meliae infects chinaberry plants has been modeled first and then studied by comparing it with existing known luciferase. Also, the similarities between uncharacterized luciferase from P. meliae and template from Geobacillus thermodenitrificans were analyzed to find the novelty of P. meliae. ResultsThe results suggest that the absence of bioluminescence in P. meliae could be due to the evolutionary mutation in positions 138 and 311. The active site remains identical except for two amino acids; P. meliae Tyr138 instead of His138 and Leu311 instead of His311. Therefore, the P. meliae will have a potential future application, and mutation of the residues 138 and 311 can be restored luciferase light-emitting ability. ConclusionsThis study will help further improve, activate, and repurpose the luciferase from P. meliae as a reporter for gene expression.

bioinformatics↗